New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1961511 =130 (1.410)101 (1.150)
+TATTTT
4/268 9.2 47.3% intergenic (‑54/+1) USA300HOU_t0017/USA300HOU_t0018 tRNA‑Ser/tRNA‑Glu
?CP000730 = 1998272 105 (1.140)noncoding (1/76 nt) USA300HOU_t0050 tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 104 total aligned reads displayed.

CAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1961647‑1961511
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATTTAT  <  CP000730/1998272‑1998192
                                                                                                                                         ||||||                                                                                 
CAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGTGGCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATT                                                                                     >  1:984018/1‑141
CAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATT                                                                                     >  1:125686/1‑141
CAGTGGTAGAGCTATCGGCTGTCAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGCCATGATT                                                                                     >  2:727459/1‑141
     GTAGAGCTATCGGCTGTTAACCGGTCTGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTACTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGA                                                                                <  1:668562/141‑1
      taagGCTATGGGATGTTAACCGATGGGTCGTAGGTTCGAGTCTTACCTGTGGGGCCATGGCTCCTTGGTCAAGCGGTTAAGACCCCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAG                                                                               <  2:760351/137‑1
      gAGAGCTGTCGGCTGTTACCCGATCGGCCGTAGGTTCGAGCCCTACCGGGGGGGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAG                                                                               <  2:62263/140‑1
       AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGA                                                                              >  2:689395/1‑141
       AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGA                                                                              >  2:738950/1‑141
       AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGA                                                                              <  2:653857/141‑1
       AGAGATATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGA                                                                              >  2:689194/1‑141
          GCTATCGGCTGTTCACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCCCCGTGGTCCAGCGGTTCAGACACCGCCCTGTCACGGCGGTAACACGGGGTCGGGTCCCGTAGGGGTCATTAGTTGGGAGAcat                                                                           >  2:137939/1‑138
          GCTATCGGCTGTTAACCTGTCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATT                                                                           <  1:619153/141‑1
          GCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTTGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATT                                                                           >  1:436600/1‑141
          GCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGGTGCTTGGTCAAGCGGTTAAGACACCGCCCTTTAGCGGCGGTAACACGGGTTCGGGTGGAGTTGGTGGCATTATTTTGGAGAATT                                                                           >  2:949807/1‑141
          GCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGTGAATT                                                                           >  1:507252/1‑141
          GCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATT                                                                           <  1:41140/141‑1
          GCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATT                                                                           >  1:378982/1‑141
          GCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATAGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGGGTCATTATTTTGGAGAATT                                                                           >  1:662641/1‑141
             ATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTACTTATTTTGGAGAATTAGC                                                                        >  2:148434/1‑141
              TCGGCTGTTAACCGATCGGTCATAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCc                                                                       >  1:206982/1‑140
                      TAACCGTTCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGG                                                               <  2:879321/141‑1
                       AACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGGAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGA                                                              >  1:172840/1‑141
                         CCGATCGGTCGTAGGTTCGAGTCGTATCGAATGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGGGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGg                                                            >  2:456259/1‑140
                          CGATCGGTCGTAGGTTCGGGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAG                                                           <  2:800920/141‑1
                          CGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGtacag                                                           <  2:862447/141‑6
                           gagCGGCCGGAGGTGCGAGTCCTACCTGTGGAGCCATGGCGCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGGCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGC                                                          <  1:92474/138‑1
                           cATCGGTCGCTGGTTCGAGTCCTGCCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGC                                                          <  2:681859/140‑1
                           GATCGGTCGTAGGTTCGCGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGC                                                          <  1:114332/141‑1
                           GATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGATTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGC                                                          <  1:876843/141‑1
                            ATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCTTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCA                                                         <  1:232720/141‑1
                             TCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCATGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGACCCGTAGGAGTCATTATTTTGGCGAATTAGCTCAGCTCGGAGAGCAT                                                        <  2:638628/141‑1
                             TCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACTGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAAGTAGCTCAGCCGGGAGAGCAT                                                        >  2:972881/1‑141
                                GTCGTAGGTTCGAGTCCTACCGGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTG                                                     <  2:394047/141‑1
                                GTCGAAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTG                                                     >  1:248741/1‑141
                                  CGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCGTTGGACACGCGGGTATGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGAAAGAGGCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCAACTGCC                                                   >  2:652946/1‑141
                                  CGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAGGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGCGAGCATCTGCC                                                   >  2:652987/1‑141
                                  CGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGGCATTATTTTGGAGAATTAGCTCAGCGGGGAGAGCATCTGCC                                                   >  2:289222/1‑141
                                  CGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGCCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCC                                                   >  2:73521/1‑141
                                  CGTAGGTTCGAGTCCTACCTGGGGAGCCCTGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCC                                                   >  2:9202/1‑141
                                   GTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGGCCCGTGGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCT                                                  >  2:517089/1‑141
                                          CGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGGGAGCATCTGCCTTACAAGC                                           >  2:623622/1‑141
                                          CGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGC                                           >  2:840709/1‑141
                                          CGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGC                                           >  2:331973/1‑141
                                            AGTCCTACCTATGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAG                                         >  1:721266/1‑141
                                             GTCCTACCTTTCGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCttgtaaggcaga                                        <  1:178288/141‑13
                                              ggCTACCTTTTGAGCTATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCCCGGCGGTAACACGGGTTCGAGTCTCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAG                                       <  1:302059/139‑1
                                              TCCTACCTGTGGAGCCAGCGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAG                                       <  1:623997/141‑1
                                                CTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGACTTACAAGCAGAGGG                                     <  1:738436/141‑1
                                                 TACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAATCGGAGGGg                                    >  1:125951/1‑140
                                                 TACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGT                                    >  2:581276/1‑141
                                                 TACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGT                                    >  2:279131/1‑141
                                                       ggggGCCAAGGCTTCTGCGTCAAGCGCCTAAGACCCCGACCCTTCACGGCGGTAACACGGGTTCGAGTGCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCGTACAAGCAGAGGGTCGGCGG                              <  1:603115/137‑1
                                                       TGGAGCCATGGCTCCTTGGTCCCGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGACACACGTAGGAGTCATTATGCGTGGTAATTAGCTCAGCTGGGAGAGCATCAGCCTTACAAGCAGAGGGTCGGCGG                              <  1:727459/141‑1
                                                       TGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGG                              <  1:689395/141‑1
                                                       TGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGG                              <  1:738950/141‑1
                                                       TGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCGGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGG                              <  1:689194/141‑1
                                                          AGCCATGGCTCCTTGGGCAAGCGGTTAAGCCACCGCCCTTCCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTC                           <  1:400336/141‑1
                                                           GCCATTGCTCCGTGGTCAAGCGGTTAAGGCACCGCCCTTTCACGGCGGTACCTCGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGTATGAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGTGTCGGCGGTTCG                          <  2:2320/141‑1
                                                           GCCATGGCTCCTTGGTCAAGCGGTTAAGACCCCGCCCTTTCACGGCGGTAACACGTGTCCTAGTCCCGTAGGAGTCTGTATTTTTGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCG                          <  2:2257/141‑1
                                                           GCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAATCATTATTTTGTAGAATTAGCTCAGCTTGGAGAGACACTGCCTTACAAGCATGAGTTCGTCGGTTCG                          >  2:4673/1‑141
                                                             CATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCATTCACGGCGGTAACACGGGTTCGAGTGCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCCTCGGCCTCACAAGCAGAGGGGCGGCGGCTCGAc                        >  2:653684/1‑140
                                                              ATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAAC                       >  2:305768/1‑141
                                                                GGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCC                     >  2:528685/1‑141
                                                                 GCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCG                    <  1:400733/141‑1
                                                                 GCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGGCATTATTTTGGAGAATTAGCTCAGCCGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTAGAACCCG                    >  2:920194/1‑141
                                                                  CTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCagg                   >  1:371796/1‑138
                                                                   cCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCCCAGCTGCGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTC                  <  2:163148/140‑1
                                                                   TCCTTGGTCAAGCGGTTAAGCCACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTC                  <  2:681030/141‑1
                                                                   TCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGGGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTC                  >  1:679266/1‑141
                                                                   TCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTC                  >  1:679332/1‑141
                                                                    cttgGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGGAACACGGGTGCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCA                 <  2:469120/137‑1
                                                                    CCTTGGTCAAGCGGTTAAGACCCCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCA                 <  1:64070/141‑1
                                                                    CCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAGCCCGTCA                 <  2:191444/141‑1
                                                                    CCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAATCCGTCA                 <  2:510916/141‑1
                                                                     CTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCAT                >  2:253441/1‑141
                                                                       TGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGGGGTTAGTAACCGTCATTC              >  2:379149/1‑141
                                                                       TGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTC              >  1:688476/1‑141
                                                                          TCAAGCGGTTAAGACACCGGCCTCTCACGGCGGTAACGCGGGTTCGAGTCCCGGAGGAGTCATTATTTTGGAGAATTGGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCC           <  2:135079/141‑1
                                                                           CAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCA          <  1:809114/141‑1
                                                                           CAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCA          <  1:814016/141‑1
                                                                           CAACCGGTTAAGACGCCGCCCTCCCACGGCGGTAACACGGGTTCGAGGCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCA          <  1:26815/141‑1
                                                                            cagtggttcacgCACCGCCCTTGCACGTCGCTAACCCGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTCGCTCAGCTGTGAGAGCATCTCCTTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCAt         <  2:444654/129‑2
                                                                            agttGGTTAAGACCCCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCAC         <  2:489008/137‑1
                                                                            aacCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTATGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTGGGCGGTTCGAACCCGTCATTCTCCAC         <  2:411911/138‑1
                                                                            AAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCAC         <  1:103190/141‑1
                                                                            AAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCAC         <  1:367645/141‑1
                                                                            AAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCAC         <  2:171557/141‑1
                                                                             gGCGGGTACGACCCCGCCCTTTCGCGGCGGTAACGCGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGTAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACC        <  1:386347/140‑1
                                                                             AGCGGTTAAGACACCGCCCTTTCACGGCGGTAACCCGGGTTCGCGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACC        <  1:929581/141‑1
                                                                              GCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCc       >  1:813826/1‑140
                                                                              GCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCA       >  1:360821/1‑141
                                                                              GCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCGGGGAGAGCAACTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACaa       >  1:305390/1‑139
                                                                               CGGTTAAGACACCGCCCTTTCACGGCGGTAACCCGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAAAGCCTCTGCCGTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCAT      <  1:385986/141‑1
                                                                               CGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCAT      >  1:613569/1‑141
                                                                               CGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCAT      >  1:172049/1‑141
                                                                                gggTAAGACCCCGCCGTTTCACGGCGGGAACACGCGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGTAGAGCTCCTGCCTCACAAGCAGAGGGTCGGCGGTTCGCACCCGTCATTCTCCACCATT     <  1:604303/138‑1
                                                                                GGTTAAGGCCCCGCCCTTTCCCGGCGGTAACCCGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATT     <  1:232402/141‑1
                                                                                GGTTAAGACACCGCCCTTTCCCGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATT     <  1:424465/141‑1
                                                                                GGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATT     <  2:895393/141‑1
                                                                                   tcAGACCCCGCCCTTTCACGCCGGCAACACGGGTTCGAGCCCCGTAGGAGTCATTATTTTGGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGTGTCGGCGGTTCGAACCCGGCATTCTCCACCATTctg  <  2:258944/139‑4
                                                                                                                                         ||||||                                                                                 
CAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCATGGCTCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAGTCCCGTAGGAGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1961647‑1961511
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGAATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAACCCGTCATTCTCCACCATTTAT  <  CP000730/1998272‑1998192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.