New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1179979 =89 (0.970)6 (0.070) 3/252 9.5 6.9% intergenic (+235/+70) USA300HOU_1109/ydiA hypothetical protein/TDT family tellurite/dicarboxylate transporter
?CP000730 1180015 = 83 (1.000)intergenic (+271/+34) USA300HOU_1109/ydiA hypothetical protein/TDT family tellurite/dicarboxylate transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCTAT  >  CP000730/1179847‑1180117
                                                                                                                                    |                                                                                                                                          
gctTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAag                                                                                                                                    >  2:993650/1‑141 (MQ=255)
gctTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAag                                                                                                                                    >  2:993621/1‑141 (MQ=255)
 ctTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAaga                                                                                                                                   >  2:524873/1‑141 (MQ=255)
 ctTATATATTATTTAAATAAAGATTAGAGTGAAACGCGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCACAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAaga                                                                                                                                   >  2:282064/1‑141 (MQ=255)
          tattTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATCTTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGAtt                                                                                                                          <  2:530338/141‑1 (MQ=255)
            tttAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTAc                                                                                                                        <  1:911133/141‑1 (MQ=255)
             ttAAATAAGGTTTAGCGTCAAACGTGTTGATGAACCAGACGTTTTTGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTAcc                                                                                                                       <  2:466277/141‑1 (MQ=255)
               aaataaaGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATGGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTg                                                                                                                     >  2:200295/1‑141 (MQ=255)
               aaataaaGTTTAGAGTGAAACGTGTTTATGAACTAGACATTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAATGAGTGAAGATTAccgg                                                                                                                     >  2:125396/1‑139 (MQ=255)
                  taaaGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAAAAGGTAGCATTGATAAGAGCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCct                                                                                                                  >  1:635244/1‑141 (MQ=255)
                    aaGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATATGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCctct                                                                                                                >  2:267535/1‑141 (MQ=255)
                     aGTTTAGATTAAAACGTGTTTATGCACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCtt                                                                                                               <  2:180517/141‑1 (MQ=255)
                       tttAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCtttt                                                                                                             >  2:153176/1‑141 (MQ=255)
                        ttAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATCGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCttttt                                                                                                            <  2:138867/141‑1 (MQ=255)
                        ttAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCttttt                                                                                                            >  1:700494/1‑141 (MQ=255)
                         tAGAGTTAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTa                                                                                                           <  1:452963/141‑1 (MQ=255)
                         tAGAGTGAAAGCTGCTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTa                                                                                                           <  2:776196/141‑1 (MQ=255)
                         tAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTa                                                                                                           >  2:606396/1‑141 (MQ=255)
                         tAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTa                                                                                                           <  1:985724/141‑1 (MQ=255)
                         tAGAGGGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTa                                                                                                           <  1:262213/141‑1 (MQ=255)
                          agagTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAg                                                                                                          <  2:695512/141‑1 (MQ=255)
                          agagTGAAACGTGTTTATGAACGAGACGTTCTAGTATAGTTACTATAGCTTTAGTCATAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAg                                                                                                          <  2:450471/141‑1 (MQ=255)
                            agTGGAACGTTTTTTTGAAATAGACGTTCTAGTAAAGTAACTATAGCTTTAGTCAGAAGGTATTATTGATAAGAACATAATAAATCAAAGAGGCATTGATATACATTAAAACGTCGTAACATTGCCTGCCTCTCTTTAGtt                                                                                                        <  2:457189/141‑1 (MQ=255)
                            agTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGtt                                                                                                        >  2:21469/1‑141 (MQ=255)
                                   cGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTTGTCAGAAGGTATCATTGATAAGATCATATTAAATCATAGAGGCATTGATATACACTAAAAAGAGGAAAGATTACCTGCCTCTTTTTAGTAATTAAat                                                                                                 >  2:5237/1‑141 (MQ=255)
                                      gtTTATGAACTAGACGTTCTAGTATAGTTACGATAGCTTTAGTGAGAAGGTATCATTGATAAGATCATAATAAATCAATGAGCCAGTGGTATACACTAAAAAGAGGCAGAATTACCGGCCTCTGTTTAGTTACTAAatatc                                                                                              >  2:625130/1‑140 (MQ=255)
                                       tttATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATaaaaaaaac                                                                                             >  2:673819/1‑136 (MQ=255)
                                       tttATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATAc                                                                                             >  1:285014/1‑141 (MQ=255)
                                       tttATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATAc                                                                                             >  2:673707/1‑141 (MQ=255)
                                         tATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGGATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACgt                                                                                           >  2:712702/1‑141 (MQ=255)
                                         tATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCACGATTACCTGCCTCTTTTTAGTTATTAAATATACgt                                                                                           >  2:66576/1‑141 (MQ=255)
                                          ttGAACTAGACGTTCTAATATATTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACgtg                                                                                          <  2:424794/140‑1 (MQ=255)
                                           tGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACgtgt                                                                                         <  2:180703/141‑1 (MQ=255)
                                           tGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACgtgt                                                                                         <  2:430784/141‑1 (MQ=255)
                                            gAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGtt                                                                                        <  1:420603/141‑1 (MQ=255)
                                              aCTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTaa                                                                                      >  1:769914/1‑141 (MQ=255)
                                              aCTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTaa                                                                                      >  2:144360/1‑141 (MQ=255)
                                                     gTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCCTTGATAAGATCATATTAAATCAAAGAGGCATTGATATGCACTAAAAAGAGGCACGATTACCTGCCTCTTTTTAGTTGTTAAAAATTCGTGTTAATTCTTgt                                                                               >  1:670223/1‑140 (MQ=255)
                                                     gTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTgg                                                                               >  2:116112/1‑141 (MQ=255)
                                                     gTTCTAGTAGGGTTACTATAGCTTCAGTCAGAAGGCTTCAATGATTAGCTCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCttcg                                                                               >  1:728466/1‑139 (MQ=255)
                                                        cTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTaa                                                                            >  1:145338/1‑141 (MQ=255)
                                                        cTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTaa                                                                            >  1:945163/1‑141 (MQ=255)
                                                        cTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTCATTAAATATACGTGTTAATTCTTGGTaa                                                                            <  1:41613/141‑1 (MQ=255)
                                                           gTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAg                                                                         >  1:164000/1‑141 (MQ=255)
                                                              taGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAgtgt                                                                      <  2:943758/141‑1 (MQ=255)
                                                              taGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAgtgt                                                                      <  1:116112/141‑1 (MQ=255)
                                                              aaGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAgtgt                                                                      <  2:869522/140‑1 (MQ=255)
                                                                  tACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACt                                                                  >  1:366752/1‑141 (MQ=255)
                                                                         gCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGc                                                           >  2:901257/1‑141 (MQ=255)
                                                                            ttAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCCTTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCGTGGTAATAGTGTTACTGAGACGCAtt                                                        >  1:149475/1‑141 (MQ=255)
                                                                            ttAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCAtt                                                        <  1:811872/141‑1 (MQ=255)
                                                                             tAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGTGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTa                                                       <  2:721014/141‑1 (MQ=255)
                                                                                  aGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACgaag                                                  >  2:562543/1‑141 (MQ=255)
                                                                                       gTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAAtt                                             <  2:323104/141‑1 (MQ=255)
                                                                                            aTTGGTAAGATCATATTAAATCAAAGAGGCATGGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTATGAAGAAATTTATCt                                        >  1:711896/1‑141 (MQ=255)
                                                                                                        atatTAAATCAAAGAGGCATTGAGATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCttt                            <  1:267535/141‑1 (MQ=255)
                                                                                                            tAAATCAAAGCGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTa                        <  2:722224/141‑1 (MQ=255)
                                                                                                            tAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTAAGAAGCATTGCGAGGAAATTTATCTTGTTTTTCCTTTTTTa                        >  2:511952/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAGGAAATTTATCTTGTTTTTCCttttttta                       >  1:334613/1‑139 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTaa                       >  2:486915/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTaa                       >  2:502600/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTaa                       >  2:868399/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTaa                       >  1:475251/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTaa                       >  2:605574/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTaa                       >  2:572482/1‑141 (MQ=255)
                                                                                                             aaaTCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATAAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGAAGCATTACGAACAAATTTATCTTGTTTTTCCTTTTTTaa                       >  2:187090/1‑141 (MQ=255)
                                                                                                                  aaaaAGTCATTGATATACACTAAAAAGACGCAAGATTATCTGCCGCTTTTTAGTTATTAAATATACGTGTTAATTATTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAaaga                  <  1:262198/141‑1 (MQ=255)
                                                                                                                  aaaGATGCATTGATATACACCAAAAAGAGGCAAGATTACCTGCTTCCTTTTAGTTATTAAATATACGTGTTAATTCGTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAaaga                  <  1:768930/141‑1 (MQ=255)
                                                                                                                   aaGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCATCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAaagaa                 >  1:683202/1‑141 (MQ=255)
                                                                                                                    agagGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTACATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGATGCATTACGAAGAAATTTGTCTTGTTTTTCCTTTTTTAAAaagaag                >  1:103639/1‑141 (MQ=255)
                                                                                                                    agagGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAaagaag                >  1:859514/1‑141 (MQ=255)
                                                                                                                    agagGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGCGTTACTGAGACGCATTACGAAGAAAATTATCTTGTTTTTCATTTTTTAAAaagaag                >  1:81378/1‑141 (MQ=255)
                                                                                                                       ggCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGa             <  1:153176/141‑1 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAACTATACGGGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTTAAAAGAAGTGaa            >  1:277469/1‑141 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTACTTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAACTTTCTCTTGTTTTTCTTTTTTTAAAAAGAAATGaa            >  2:938292/1‑141 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGaa            >  1:327235/1‑141 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGaa            >  1:133763/1‑141 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGaa            >  2:964005/1‑141 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGaa            >  2:963867/1‑141 (MQ=255)
                                                                                                                        gCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGaa            >  1:560275/1‑141 (MQ=255)
                                                                                                                          aTTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGa          >  1:357013/1‑141 (MQ=255)
                                                                                                                              atatACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATc      <  2:164000/141‑1 (MQ=255)
                                                                                                                                 taCACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCta   <  1:272883/141‑1 (MQ=255)
                                                                                                                                 taCACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCta   <  1:993621/141‑1 (MQ=255)
                                                                                                                                 taCACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCta   <  1:993650/141‑1 (MQ=255)
                                                                                                                                 taCACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCta   <  1:886591/141‑1 (MQ=255)
                                                                                                                                  acacTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCtat  <  2:939878/141‑1 (MQ=255)
                                                                                                                                  acacTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCtat  <  1:606396/141‑1 (MQ=255)
                                                                                                                                  acacTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCtat  <  2:652047/141‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                          
GCTTATATATTATTTAAATAAAGTTTAGAGTGAAACGTGTTTATGAACTAGACGTTCTAGTATAGTTACTATAGCTTTAGTCAGAAGGTATCATTGATAAGATCATATTAAATCAAAGAGGCATTGATATACACTAAAAAGAGGCAAGATTACCTGCCTCTTTTTAGTTATTAAATATACGTGTTAATTCTTGGTAATAGTGTTACTGAGACGCATTACGAAGAAATTTATCTTGTTTTTCCTTTTTTAAAAAGAAGTGAAGATATCCTAT  >  CP000730/1179847‑1180117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.