New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | = 848580 | 138 (1.090) | 8 (0.070) +CTGAAAAAAAAAA |
7/270 | 5.5 | 5.4% | coding (101/312 nt) | USA300HOU_0793 | hypothetical protein |
? | CP000730 | 2866847 = | 167 (1.320) | intergenic (‑246/+207) | USA300HOU_2711/noc | hypothetical membrane protein/possible transcriptional regulator | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
Only 100 of 141 total aligned reads displayed.
AAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTAGGACATTGAT > CP000730/848432‑848727 | aaGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGCATTTCTTTTCGAAATTCCCTGTGTTGGGGccc > 1:6669/1‑149 (MQ=255) gCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCTCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAGTCTCTGTGTTGGGGCCcac > 1:858125/1‑149 (MQ=255) gCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAGCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCcac > 1:543696/1‑149 (MQ=255) gCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCcac > 2:335019/1‑149 (MQ=255) cTGACTTTTCGTCAGCTTCTGTGTTTGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGGAATTCTCTGTGTTGGGGCCcaca > 2:557225/1‑149 (MQ=255) cTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGCATATCTTTTCGACATTCTCGGTGTTGGGGcccccc > 2:565905/1‑146 (MQ=18) cTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCcaca > 1:789964/1‑149 (MQ=255) cTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTACCTGTGTTGGGGCCcacc > 2:556967/1‑148 (MQ=255) tCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACCCCC‑CAACTCGc > 1:1070696/1‑149 (MQ=255) tCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGc > 1:175621/1‑149 (MQ=255) tCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCAGTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGc < 1:479743/149‑1 (MQ=255) cAGCTTCTGTGTTGGGGCCCCCCCAACTTGCATTGTCTGTAGCAAGTTGGAACCCAATTTACGTAGGTAGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTTTGTTGGGGCCCACAACC‑CAACTCCCa > 2:611100/1‑149 (MQ=17) cTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCATCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTg < 1:198343/149‑1 (MQ=255) cTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGCAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTg < 1:1096772/149‑1 (MQ=255) ttgttTTGGGGCCCCGCTGTCTTGCATTGTCTGTAGAAACCTGTAATCCACTTACTCTATGTTGGTGCCCACCCCCCATCTCGCATTGCCTGTAGAATTTCTATTCCAATTTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCt < 2:153779/148‑1 (MQ=18) cTGTTTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCt < 1:270073/149‑1 (MQ=255) cTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCt < 1:201704/149‑1 (MQ=255) tgtgTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTg < 1:566046/149‑1 (MQ=255) tgtgTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTg < 1:1184378/149‑1 (MQ=255) tgtgTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACACCAACTCGCCTTGCCTGTAGAATTTCTTTTCGCAGTTCTCTGTGTTGGGGCCCACCCCC‑CACTTCGCGTTGcgcg > 2:1041582/1‑146 (MQ=17) gtTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGtcg > 2:860256/1‑147 (MQ=255) gtTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAg > 1:210059/1‑149 (MQ=255) gtTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAg > 1:223546/1‑149 (MQ=255) gtTGGGGCCCCGCCAACTTGCATTCACTGTGGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCCACCC‑CAACTGGCATTGCCTGTAg > 2:291731/1‑149 (MQ=18) tGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTATaa > 1:240742/1‑149 (MQ=255) tGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGaa > 2:767246/1‑149 (MQ=255) ggCTCCGCGAACTTGCATTGTCTTTAGAAATTTGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCGTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAAttt < 2:44679/149‑1 (MQ=18) ccccGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCt > 2:1058783/1‑149 (MQ=255) ccccGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCt > 2:831507/1‑149 (MQ=255) cccGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCtt < 1:605322/149‑1 (MQ=255) ccGCCAAGTTGTATTGTCTGTAGCAATTTGGAATGCAGTTTGTTTGTGTTGGGGCTCATAGCCTATCTCGCTTTGCTTGTAGAAGTTCTTGTCGAATTTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCttt < 2:610519/149‑1 (MQ=17) cGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTGTCCGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCtttt < 2:669995/149‑1 (MQ=255) cTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTTTAGATTTTCTTTTCAAAAt > 2:550151/1‑149 (MQ=255) ttGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCCACCC‑CAAGTCGCAATAACTGTAGTATTTCtgctttttatt > 2:535511/1‑139 (MQ=17) tGCTTTGTCTGTAGAAATTGGGCATCCACTTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATtc < 1:1170270/149‑1 (MQ=255) tGCACTGCCTGTAGACATTGGGAACCCAATTTCGCTATGTCGGCGCCCACACCCCACCTCGCACTGCCTGTAGAATTTCTTCTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATtc < 1:28002/149‑1 (MQ=21) ccgttctctcTAGAAATTGGAATTACAATATCTCTATGTTGGGGCCCACCCCCCACCTCGCGTCGCCTGTAGAATTTCTTTTCTAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATtct < 2:354716/143‑1 (MQ=21) cTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGtt > 1:265162/1‑149 (MQ=255) cTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGtt > 1:216442/1‑149 (MQ=255) aaaGTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCGCACCC‑CAACTCGCATTGCCGGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcc < 1:191352/149‑1 (MQ=255) tGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTGTCGACATTCTCTGTGTTGGGGCCCCTg < 1:737447/149‑1 (MQ=255) ggAATCCAATTTCTCTATGTTGGGGCCCACCCCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGGAATTCGCTGTGTTGGGGCCCCCACCC‑CAACTCGCATTGACTGTAGAATTTGCTTTCGAAATTCCCTGTCTTGGGGCCCCttga > 2:11368/1‑146 (MQ=21) aaTCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCACACACCC‑CCACTCGCATTGCCTGTAGAATTTCTTTTCGAATTTCCCTGTGGCTGGGCCCCTgtcga > 2:431505/1‑145 (MQ=21) tCCAATTTCTCTATGTTGGGGCCCGCGCCCCAACTCGCATTGCCGGTAGAATTTCCTTTCCAACTTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTaga < 1:395804/149‑1 (MQ=21) gtcctcttCTCTCTGTTGCGGCCCTCACCCCCACTCGCACTGCCTACAGCATTTCTTTTCGAAATCCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGATATTCTCTGTGTTGGGGCCCCTGACTaga < 1:942685/143‑1 (MQ=17) cAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGt < 1:998494/149‑1 (MQ=255) tttCTCTATGTTGGGGCCCCCCCCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGa < 2:1071610/149‑1 (MQ=255) ctATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGaaaaaa < 1:1213187/149‑1 (MQ=255) ctATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGaaaaaa > 1:1145338/1‑149 (MQ=255) tATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAg < 2:175621/149‑1 (MQ=255) ttgtgGGGGCCCACCCCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGc < 1:378026/148‑1 (MQ=255) aTGTTGGGGCCCACACCCCAACTCCCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGc > 1:796874/1‑149 (MQ=255) tGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCt > 1:831845/1‑149 (MQ=255) gTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCtt > 1:401337/1‑149 (MQ=255) ccACACCCCATCTCGCACTCCCTGTTGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAg < 1:161516/149‑1 (MQ=255) cctccccAATTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAgcg < 2:494972/146‑1 (MQ=255) ctccctagcccgcgTTGCTTTTAGACTTTCTTTGCGAAATTCTCTGTGTTGGGGCCCACCCCC‑CAACTCGCATTGCCTGTAGAATTTCTGTTCGAAATTCTCTGTGTTGGGGCCCCTTACTAGAGTTGAAAAAAGCTTGTTGCAAgcgc < 2:1205411/139‑1 (MQ=17) ccaCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGACAAAAGCTTGTTGCAAGCGCAtttt < 1:689635/147‑1 (MQ=255) cAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCAtttt > 1:1013176/1‑149 (MQ=255) cAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGAAAAAAAATAAAAAAAGCTTGTTGCAAGCGCAtttt < 2:500083/149‑1 (MQ=18) cGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCCATATCTATAGTTG‑CTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTttcattc < 1:1320623/149‑1 (MQ=21) tccTTTAGTATTTCTTTGCGAAATTCTCTGTGTTGGAGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCaa < 2:1342380/148‑1 (MQ=255) gCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCaa < 2:944002/149‑1 (MQ=255) gCCTGTAGAATTCCTTTGCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCACATTTTCATTCAGTCaa < 1:171740/149‑1 (MQ=255) cccTGTAGAGTTCCGTTTTGGAATTCTCTGTGTCGGGGCCCACGCCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCTGACTATAGTGGAAAAAAGATTGTTGCAAGCGCAGTGTCATTCAGTCaa < 2:817899/148‑1 (MQ=14) cTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAact < 1:335019/149‑1 (MQ=255) tGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAacta < 2:838586/149‑1 (MQ=255) tAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAactact < 1:661218/149‑1 (MQ=255) gggctttCTTTGCGAAATTCTCGGTGTTGGGGCCCACACCC‑CAACTCGCATTGCTTGTAGGATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAActacta < 2:706120/145‑1 (MQ=17) aGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAActacta < 1:1282304/149‑1 (MQ=255) aGAATTTCTTTGCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAActacta < 1:241409/149‑1 (MQ=255) aGAATTTCTTTCCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAActacta < 1:1302020/149‑1 (MQ=255) gAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCACACCC‑CACCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACCAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAg < 1:1019526/149‑1 (MQ=255) gAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCTCATTTTCATTCAGTCAACTACTAg < 1:800501/149‑1 (MQ=255) gAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAg < 1:602031/149‑1 (MQ=255) gAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAg < 1:1014514/149‑1 (MQ=255) agaTTTGTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAg < 2:1209774/147‑1 (MQ=255) aaTTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGc < 2:6669/149‑1 (MQ=255) aaTTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGc < 2:533500/149‑1 (MQ=255) aaTTGCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAACTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGc < 1:52850/149‑1 (MQ=255) aTTTCTTTTCGACATCCTCTGTGTTGGGGCCCACCCCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAATCGCATTTTCATTCAGTCAACTACTAGCa < 2:120657/149‑1 (MQ=255) aTTTCTTTTCGAAATTCTCTGTGTTGGGTCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTGGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCa < 1:760591/149‑1 (MQ=255) aTTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCa < 2:82939/149‑1 (MQ=255) tttCTTTTCGAACTTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTCGAATTTCTTTTCGCCATTCTCTGTGTTAGGGCCCCTGACTACAGATGAAAAAAGCTTGTTGCAAACACATTTTCATTGAGTCAACTACTAGCaa > 2:924322/1‑149 (MQ=17) tttCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCaa < 2:1245341/149‑1 (MQ=255) tttCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCaa > 2:123917/1‑149 (MQ=255) tttCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTAATTCAGTCAACTATTAGCaa > 2:505704/1‑149 (MQ=255) tttCCTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCaa < 1:396523/149‑1 (MQ=255) ttCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCaat > 1:513147/1‑149 (MQ=255) tcctttCGAAATTCTCCGCGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGGAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCaata < 1:465827/146‑1 (MQ=255) tCTTTTCGAACTTCTCACGGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAAAATTAAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCaata < 2:869043/149‑1 (MQ=14) tctGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGAcc < 1:1138145/149‑1 (MQ=255) ctGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTCGGGGCCCCCGACTCGATTTGAAAAAAGCTTGTTGCAAGCGCCTTTTCATTAAGTCAACTACTAGAAAGATAATAATATAAAccc > 2:326715/1‑149 (MQ=14) gtTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGAGCCTAgg > 1:532994/1‑149 (MQ=255) ttGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTAGGa < 1:1135328/149‑1 (MQ=255) tGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGAGCCTTTTCATTCGGTCAACTACTAGCAATATAATATTATAGACCCTAGGAc > 1:1254788/1‑149 (MQ=255) gggCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTGGGACAt > 1:163429/1‑149 (MQ=255) gggCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCGCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTAGGGCAt > 1:948620/1‑149 (MQ=255) ggCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTAGGACAtt < 2:543696/149‑1 (MQ=255) ccACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTAGGACATTGAt > 2:25974/1‑149 (MQ=255) | AAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTATGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCACACCC‑CAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTGCAAGCGCATTTTCATTCAGTCAACTACTAGCAATATAATATTATAGACCCTAGGACATTGAT > CP000730/848432‑848727 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |