New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	920680 =	30 (0.790)	3 (0.090)	3/248	5.2	10.4%	coding (97/849 nt)	yunF	hypothetical protein
	?	CP000730	920729 =	24 (0.690)					coding (146/849 nt)	yunF	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACATCGGATTAACAGGTTGGGGTGATCACTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAATTTAAGAA  >  CP000730/920590‑920864                                                                                                                                            |                                                                                                                                        aaCACCGGATCAACAGGTGGGGGTGATAACTATTCATTATATCAAGATTTAGAACGCCATACCGATAAACTTAAAACATATGCTGGACCTTTTCCGGTAGTCGAATTAGATGCGACATACTATGCGATACAACCGgaaaga                                                                                                                                        >  2:438034/1‑141 (MQ=255)      cGGATTAACAGTGGCGGGTGATCACCATCCATTATATGAAGATTTAGAACGCCACACCGATAAACATAAAACATATGCTGGACATTCTCCGCCTCTCGAATTAGATGCGCCATACTATGCGATACAACCGgaaagacctat                                                                                                                                   >  2:118108/1‑136 (MQ=255)      cGGATTAACAGGTTGGGGTGATCACTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAatat                                                                                                                                   >  2:418853/1‑141 (MQ=255)        gATTAACAGGTTGGGGTGATCACTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAatatat                                                                                                                                 >  1:419997/1‑141 (MQ=255)                      ggTGATCACTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATaaaa                                                                                                                   >  2:316194/1‑141 (MQ=255)                        tGATCACTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGa                                                                                                                 <  1:305378/141‑1 (MQ=255)                             aCTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGc                                                                                                            <  2:276212/141‑1 (MQ=255)                                      tataTGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACAt                                                                                                   <  1:46372/141‑1 (MQ=255)                                       atatGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATGCAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACAtt                                                                                                  <  2:213428/141‑1 (MQ=255)                                       atatGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACAtt                                                                                                  <  2:428615/141‑1 (MQ=255)                                               aTTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTtg                                                                                          >  2:259700/1‑141 (MQ=255)                                                  tAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCTACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTgg                                                                                       <  2:427818/141‑1 (MQ=255)                                                    gAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTc                                                                                     >  1:209509/1‑141 (MQ=255)                                                        gCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCaaaa                                                                                 <  1:50051/141‑1 (MQ=255)                                                        gCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCaaaa                                                                                 <  1:148068/141‑1 (MQ=255)                                                              ccGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATtcatc                                                                           >  1:397793/1‑141 (MQ=255)                                                                   aaaCTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGgaaag                                                                                                                                         <  2:213412/74‑1 (MQ=255)                                                                   aaaCTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGgaaag                                                                                                                                         >  1:213412/1‑74 (MQ=255)                                                                           aaCATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACAtt                                                              <  2:326415/141‑1 (MQ=255)                                                                                atGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATtgcatg                                                         >  1:109701/1‑141 (MQ=255)                                                                                     ggACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGAc                                                    >  1:205691/1‑141 (MQ=255)                                                                                          ttttCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACaa                                               <  1:195314/141‑1 (MQ=255)                                                                                                              aTGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGc                           <  1:259700/141‑1 (MQ=255)                                                                                                                                tACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAAt         >  1:115890/1‑141 (MQ=255)                                                                                                                                  cAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAAttt       >  2:419151/1‑141 (MQ=255)                                                                                                                                  cAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAAttt       >  1:80248/1‑141 (MQ=255)                                                                                                                                    aCCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAATTTaa     <  2:115890/141‑1 (MQ=255)                                                                                                                                       ggAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAATCTAAGaa  >  2:234848/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                        AACATCGGATTAACAGGTTGGGGTGATCACTATTCATTATATGAAGATTTAGAACGCCAAACCGATAAACTTAAAACATATGCTGGACATTTTCCGGTTGTCGAATTAGATGCGACATACTATGCGATACAACCGGAAAGAAATATATTGAAATGGATAAAAGAAACGCCTGATACATTTGAATTTGTGGTCAAAATTCATCAAGCACTCACATTGCATGCAGACTACAAAACATTTGCAGATACAAGGCAAGAACTATTTGATCAATTTAAGAA  >  CP000730/920590‑920864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.