New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2661788 =114 (1.200)3 (0.040) 3/254 10.8 3.0% intergenic (‑181/‑140) USA300HOU_2514/USA300HOU_2515 HAD superfamily hydrolase/ABC superfamily ATP binding cassette transporter, ABC protein
?CP000730 2661832 = 90 (1.070)intergenic (‑225/‑96) USA300HOU_2514/USA300HOU_2515 HAD superfamily hydrolase/ABC superfamily ATP binding cassette transporter, ABC protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

CATTATATCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACT  >  CP000730/2661641‑2661935
                                                                                                                                                   |                                                                                                                                                    
cATTATATCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAAATCCAGAATATTGAAAAAat                                                                                                                                                     >  2:349761/1‑149 (MQ=255)
     tatCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATcac                                                                                                                                                <  2:855794/149‑1 (MQ=255)
     tatCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATcac                                                                                                                                                <  2:517773/149‑1 (MQ=255)
     tatCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATcaa                                                                                                                                                >  2:527863/1‑148 (MQ=255)
      atCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATcaca                                                                                                                                               >  2:879994/1‑149 (MQ=255)
       tCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACCGGATATAGCGCGCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCacac                                                                                                                                              >  2:771193/1‑149 (MQ=255)
        ccATCTCATGACACGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAat                                                                                                                                                     <  1:1001337/141‑1 (MQ=255)
           tctcATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATc                                                                                                                                                  >  1:1068251/1‑141 (MQ=255)
               aTGACAAGCAATGAAGTTTGTCATACCACAATGACCCTAGATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTa                                                                                                                                     <  2:136764/149‑1 (MQ=255)
                acaCAAGCAATCGAGTTTGACATACGACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATAGAGCATTCATAGGCCAACATAAATTTCAGAATATTTTAAAAATATCACACt                                                                                                                                             <  1:976681/139‑1 (MQ=255)
                  aCAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACACtat                                                                                                                                           >  1:296064/1‑141 (MQ=255)
                     aGCAATGAAAGTTGTCATACCAAAAAGAACCTATATACACATTTTGAAATTGCTTTCATATAAGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCAttt                                                                                                                               <  2:109753/149‑1 (MQ=255)
                        aaTGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTAt                                                                                                                                    <  1:768973/141‑1 (MQ=255)
                               tttGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTat                                                                                                                             >  1:297660/1‑140 (MQ=255)
                               tttGTAATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTATGAAAATATCACACTATATTTATCATTTAg                                                                                                                             >  1:540655/1‑141 (MQ=255)
                                ttGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGa                                                                                                                            <  1:410042/141‑1 (MQ=255)
                                    cATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACaaa                                                                                                                        >  1:249130/1‑141 (MQ=255)
                                    cATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTGATCATTTAGACAAAATATAgtg                                                                                                                <  2:489524/149‑1 (MQ=255)
                                      tACCACAATGAACCTATAGTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAat                                                                                                                      <  1:408089/141‑1 (MQ=255)
                                        ccACAATGAACCTATATTCACATTTTGAGATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTTTCATTTAGACATAATATAGTGTGat                                                                                                            >  2:896504/1‑149 (MQ=255)
                                        ccACAATGAACCCATAACCACATTTTGAAATTGCTTTCAAATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATAGCACACTATATTTATCATTTAGACAAAATATAGTGTGat                                                                                                            <  2:571878/149‑1 (MQ=255)
                                          acaATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCCTTTAGTCAAAATATAGTGTGatat                                                                                                          >  2:251311/1‑149 (MQ=255)
                                          acaATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGatat                                                                                                          >  2:597510/1‑149 (MQ=255)
                                           caATTAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGAtata                                                                                                         <  2:346939/149‑1 (MQ=255)
                                                aaCCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGAATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGCAAAAATATAGTGTGATATACTAAt                                                                                                    >  2:134190/1‑149 (MQ=255)
                                                  tcTATATTCACATTTTGATATTGCTTTTATATATGTAAAACACATTACACCGGATAAAGCATTCAGAGGCGAACACAAATTTCAGAATATTGTAAAATTATCTCTCTATATTTATCATTTAGACAAATTATAGTGTGatat                                                                                                          <  1:1105447/140‑1 (MQ=255)
                                                  ccTATATTCCCATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGatat                                                                                                          <  1:176789/141‑1 (MQ=255)
                                                       atTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAAc                                                                                             >  2:817139/1‑149 (MQ=255)
                                                       atTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAAc                                                                                             >  2:611200/1‑149 (MQ=255)
                                                        ttCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAAt                                                                                                    >  1:162948/1‑141 (MQ=255)
                                                        ttCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAAt                                                                                                    >  1:595269/1‑141 (MQ=255)
                                                        ttCACATTTTGAAATTGCTTTCATATAGGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGGTATACTAATTTATAACa                                                                                            >  2:560057/1‑149 (MQ=255)
                                                         tcactctttGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGACGCGAACATAAAACTCTGAATATGGTACAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAAtt                                                                                                   <  1:956170/135‑1 (MQ=255)
                                                         tCACATTTTTAATTTGTTTTCATATATTCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAAtt                                                                                                   <  1:630034/141‑1 (MQ=255)
                                                         tCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAAtt                                                                                                   <  1:1013286/141‑1 (MQ=255)
                                                          cacaTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATc                                                                                          >  2:874036/1‑149 (MQ=255)
                                                                ttGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACa                                                                                            >  1:228351/1‑141 (MQ=255)
                                                                      ttGCTCTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTCATTTATAACATCTATACATAAtgt                                                                              <  2:463630/149‑1 (MQ=255)
                                                                         cTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGaa                                                                           >  2:52737/1‑149 (MQ=255)
                                                                         cTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGaa                                                                           >  2:67021/1‑149 (MQ=255)
                                                                                 tatGCAAAACACATTACACTGGATCAAGCTTCCATATGCTGACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAtttt                                                                   >  2:452304/1‑149 (MQ=255)
                                                                                   tGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATAGTAATCCATAGCGACTATTTTTAATGTGaactcacctcta                                                                 >  2:916684/1‑139 (MQ=255)
                                                                                      aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAGAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                              >  2:505677/1‑149 (MQ=255)
                                                                                      aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAGAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                              >  2:505844/1‑149 (MQ=255)
                                                                                      aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                              >  2:262973/1‑149 (MQ=255)
                                                                                       aaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATCTAATAATTTATAACATCTATACATAATGTGAAAGAAtt                                                                     >  1:317860/1‑141 (MQ=255)
                                                                                        aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAATATCTATACAGAATGTGAAAGAATTTTTAAAAAt                                                            <  2:469238/149‑1 (MQ=255)
                                                                                        aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAAt                                                            >  2:830945/1‑149 (MQ=255)
                                                                                        aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAAt                                                            <  2:460701/149‑1 (MQ=255)
                                                                                          cacaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttttt                                                                  >  1:130859/1‑141 (MQ=255)
                                                                                          cacaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttttt                                                                  >  1:316925/1‑141 (MQ=255)
                                                                                           acaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACa                                                         <  2:93622/149‑1 (MQ=255)
                                                                                           acaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACa                                                         <  2:928242/149‑1 (MQ=255)
                                                                                             aTTACACTGGATATAGCATTGAGAGGCGAACATAAATTTCAGAAGATTGTAAAAATATCACACTATATTTATCATTTAGACAAAAGATAGTGTGATATACTAATTTAGAACATCTATACATAATGTGAAAGAATTTTTaaa                                                               >  1:654458/1‑141 (MQ=255)
                                                                                             aTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaa                                                               >  1:81008/1‑141 (MQ=255)
                                                                                                    tGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAatat                                                >  2:240742/1‑149 (MQ=255)
                                                                                                       atatAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCgg                                             >  2:659247/1‑149 (MQ=255)
                                                                                                        tataGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATCTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTaa                                                    <  1:772791/141‑1 (MQ=255)
                                                                                                          taGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGgtgt                                          <  2:359040/149‑1 (MQ=255)
                                                                                                           aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAaataaata                                                 >  1:14459/1‑141 (MQ=255)
                                                                                                           aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAata                                                 >  1:556602/1‑141 (MQ=255)
                                                                                                           aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAata                                                 >  1:1031566/1‑141 (MQ=255)
                                                                                                             cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtatt                                       >  2:205257/1‑147 (MQ=255)
                                                                                                             cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  2:918597/149‑1 (MQ=255)
                                                                                                             cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCAAACTCTAATTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  2:918058/149‑1 (MQ=255)
                                                                                                                  agagGCGAACATAAATTTCAGAATATTGTAAAAATATCAACTTTTTGTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCCATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATc                                  <  2:256125/149‑1 (MQ=255)
                                                                                                                    agcccaaCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaa                                        <  1:1074480/136‑1 (MQ=255)
                                                                                                                     ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  1:209174/141‑1 (MQ=255)
                                                                                                                     ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  1:326350/141‑1 (MQ=255)
                                                                                                                     ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  1:453772/141‑1 (MQ=255)
                                                                                                                     ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCt                               >  2:932797/1‑149 (MQ=255)
                                                                                                                     ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGAGTGATACACCAATTTATAACATCTAGACATATTGTGAAAGAATTTTTAAAAATATAATCAAATATCGGTGTAATAAATCCCt                               <  2:698965/149‑1 (MQ=255)
                                                                                                                     ggCGAACATAAATGTAAGAATACTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  1:924344/141‑1 (MQ=255)
                                                                                                                     atggAACATAAATTTCAGAATTTTGTAAAAAGATCACATTAACTTTAAAATTTAAACAAATTATAGTGTGATTTACTACTTTATAACATCTATACATAATGTGAAAGAATTCTTAAAAATACAATTAAATCTCGGTGtaat                                       <  1:513563/138‑1 (MQ=255)
                                                                                                                     agCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                       <  1:10219/140‑1 (MQ=255)
                                                                                                                      gCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCtt                              >  2:812919/1‑149 (MQ=255)
                                                                                                                      gCGAACATAAATTTCAGAATATTGTAAAAATATCACAATATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTATAAATACAATTAAATATCGGTGtaata                                      <  1:715705/141‑1 (MQ=255)
                                                                                                                       ttaaCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaataa                                     <  1:586832/139‑1 (MQ=255)
                                                                                                                       cGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaataa                                     <  1:261000/141‑1 (MQ=255)
                                                                                                                         aaCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAAt                                   <  1:1187781/141‑1 (MQ=255)
                                                                                                                         aaCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAAt                                   >  1:551917/1‑141 (MQ=255)
                                                                                                                          aCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATc                                  <  1:686187/141‑1 (MQ=255)
                                                                                                                          aCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTtata                          <  2:334693/149‑1 (MQ=255)
                                                                                                                             tAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCt                               >  1:1113300/1‑141 (MQ=255)
                                                                                                                             tAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACaa                       >  2:612136/1‑148 (MQ=255)
                                                                                                                             tAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACAt                       >  2:348310/1‑149 (MQ=255)
                                                                                                                             tAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACAt                       >  2:414620/1‑149 (MQ=255)
                                                                                                                              aaaTTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAACTAAATATCGTTGTAATAAATCCCTTTATACATa                      <  2:469345/149‑1 (MQ=255)
                                                                                                                                   tcataaatttGTAAAAATATCACACTATATTTATCCTTTACACAAAAGATAGTGTGATATACTAATTTATAACATCTATACAGAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGt                 <  2:77250/141‑1 (MQ=255)
                                                                                                                                   taaaaataaagaaaaaaTATCACACTATATTTATCATTTAGACAAAATATAGTTTTATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATAc                         <  1:658003/129‑1 (MQ=255)
                                                                                                                                    cAGAATATCGTAAAAATATCACACTACAATGAACATTTAGACAAAATATAGTGGGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGtt                <  2:803942/149‑1 (MQ=255)
                                                                                                                                     aGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTg               <  2:128271/149‑1 (MQ=255)
                                                                                                                                     aGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATAAAAATTGCGTGTAATAAATCCCTTTATACATAGGAGTTg               <  2:930305/149‑1 (MQ=255)
                                                                                                                                      aaaTATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGt              <  2:682841/148‑1 (MQ=255)
                                                                                                                                       actatTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAATAATTTTTAAAAGTAAGATTAAATATCGTTGTAATAAATCCCTGTATACATAGGAGTTGta             <  2:685661/147‑1 (MQ=255)
                                                                                                                                         tagtGTAAAAATATCCCACTATATTTATCATTTAGACAAAATATAGTGCGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCTCTTTATACATAGGAGTTGtata           <  2:499485/146‑1 (MQ=255)
                                                                                                                                               aaacaTATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaa     <  2:586136/149‑1 (MQ=255)
                                                                                                                                               aaaaaTATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaa     <  2:729525/149‑1 (MQ=255)
                                                                                                                                                aaaaTATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaaa    >  2:340928/1‑149 (MQ=255)
                                                                                                                                                  aaTATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACt  <  2:29051/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CATTATATCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACT  >  CP000730/2661641‑2661935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.