New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2661788 =	114 (1.200)	3 (0.040)	3/254	10.8	3.0%	intergenic (‑181/‑140)	USA300HOU_2514/USA300HOU_2515	HAD superfamily hydrolase/ABC superfamily ATP binding cassette transporter, ABC protein
	?	CP000730	2661832 =	90 (1.070)					intergenic (‑225/‑96)	USA300HOU_2514/USA300HOU_2515	HAD superfamily hydrolase/ABC superfamily ATP binding cassette transporter, ABC protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAACAAACAACTAGT  >  CP000730/2661684‑2661974                                                                                                                                                      |                                                                                                                                               caATTAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGAtata                                                                                                                                                <  2:346939/149‑1 (MQ=255)      aaCCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAAt                                                                                                                                           >  2:560914/1‑149 (MQ=255)      aaCCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGAATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGCAAAAATATAGTGTGATATACTAAt                                                                                                                                           >  2:134190/1‑149 (MQ=255)         cTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACGCATTACACTGGATATAGCCTTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTta                                                                                                                                        <  2:491990/149‑1 (MQ=255)             atTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTATTTTATAAc                                                                                                                                    >  2:938232/1‑149 (MQ=255)             atTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAAc                                                                                                                                    >  2:611200/1‑149 (MQ=255)             atTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAAc                                                                                                                                    >  2:817139/1‑149 (MQ=255)              ttCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAAt                                                                                                                                           >  1:595269/1‑141 (MQ=255)              ttCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAAt                                                                                                                                           >  1:162948/1‑141 (MQ=255)              ttCACATTTTGAAATTGCTTTCATATAGGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGGTATACTAATTTATAACa                                                                                                                                   >  2:560057/1‑149 (MQ=255)               tcactctttGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGACGCGAACATAAAACTCTGAATATGGTACAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAAtt                                                                                                                                          <  1:956170/135‑1 (MQ=255)               tCACATTTTTAATTTGTTTTCATATATTCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAAtt                                                                                                                                          <  1:630034/141‑1 (MQ=255)               tCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAAtt                                                                                                                                          <  1:1013286/141‑1 (MQ=255)                cacaTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATc                                                                                                                                 >  2:874036/1‑149 (MQ=255)                cacaTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATc                                                                                                                                 >  2:261548/1‑149 (MQ=255)                  caTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCta                                                                                                                               <  2:90205/149‑1 (MQ=255)                      ttGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACa                                                                                                                                   >  1:228351/1‑141 (MQ=255)                        gAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATGGTATGAGATACAAAATTATaaattc                                                                                                                                 >  1:1165586/1‑137 (MQ=255)                            ttGCTCTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTCATTTATAACATCTATACATAAtgt                                                                                                                     <  2:463630/149‑1 (MQ=255)                               cTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGaa                                                                                                                  >  2:52737/1‑149 (MQ=255)                               cTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGaa                                                                                                                  >  2:67021/1‑149 (MQ=255)                                       tatGCAAAACACATTACACTGGATCAAGCTTCCATATGCTGACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAtttt                                                                                                          >  2:452304/1‑149 (MQ=255)                                         tGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATAGTAATCCATAGCGACTATTTTTAATGTGaactcacctcta                                                                                                        >  2:916684/1‑139 (MQ=255)                                            aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAGAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                                                                     >  2:505677/1‑149 (MQ=255)                                            aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAGAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                                                                     >  2:505844/1‑149 (MQ=255)                                            aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATTCGATACCGGACTACTTTCTAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                                                                     >  2:676597/1‑149 (MQ=255)                                            aaaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaaa                                                                                                     >  2:262973/1‑149 (MQ=255)                                             aaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATCTAATAATTTATAACATCTATACATAATGTGAAAGAAtt                                                                                                            >  1:317860/1‑141 (MQ=255)                                              aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAATATCTATACAGAATGTGAAAGAATTTTTAAAAAt                                                                                                   <  2:469238/149‑1 (MQ=255)                                              aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAAt                                                                                                   <  2:460701/149‑1 (MQ=255)                                              aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAAt                                                                                                   >  2:830945/1‑149 (MQ=255)                                                cacaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttttt                                                                                                         >  1:316925/1‑141 (MQ=255)                                                cacaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttttt                                                                                                         >  1:130859/1‑141 (MQ=255)                                                 acaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACa                                                                                                <  2:928242/149‑1 (MQ=255)                                                 acaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACa                                                                                                <  2:93622/149‑1 (MQ=255)                                                   aTTACACTGGATATAGCATTGAGAGGCGAACATAAATTTCAGAAGATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAAGATAGTGTGATATACTAATTTAGAACATCTATACATAATGTGAAAGAATTTTTaaa                                                                                                      >  1:654458/1‑141 (MQ=255)                                                   aTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTaaa                                                                                                      >  1:81008/1‑141 (MQ=255)                                                          tGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAatat                                                                                       >  2:240742/1‑149 (MQ=255)                                                             atatAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCgg                                                                                    >  2:659247/1‑149 (MQ=255)                                                              tataGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATCTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTaa                                                                                           <  1:772791/141‑1 (MQ=255)                                                                taGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGgtgt                                                                                 <  2:359040/149‑1 (MQ=255)                                                                 aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAaataaata                                                                                        >  1:14459/1‑141 (MQ=255)                                                                 aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAata                                                                                        >  1:738472/1‑141 (MQ=255)                                                                 aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAata                                                                                        >  1:1031566/1‑141 (MQ=255)                                                                 aGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAata                                                                                        >  1:556602/1‑141 (MQ=255)                                                                   cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtatt                                                                              >  2:205257/1‑147 (MQ=255)                                                                   cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  2:918597/149‑1 (MQ=255)                                                                   cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCAAACTCTAA‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  2:918058/149‑1 (MQ=255)                                                                        agagGCGAACATAAATTTCAGAATATTGTAAAAATATCA‑ACTTTTTGTTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCCATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATc                                                                         <  2:256125/149‑1 (MQ=255)                                                                          agcccaaCATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaa                                                                               <  1:1074480/136‑1 (MQ=255)                                                                           ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  1:453772/141‑1 (MQ=255)                                                                           ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  1:326350/141‑1 (MQ=255)                                                                           ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  1:209174/141‑1 (MQ=255)                                                                           ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCt                                                                      >  2:932797/1‑149 (MQ=255)                                                                           ggCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGAGTGATACACCAATTTATAACATCTAGACATATTGTGAAAGAATTTTTAAAAATATAATCAAATATCGGTGTAATAAATCCCt                                                                      <  2:698965/149‑1 (MQ=255)                                                                           ggCGAACATAAATGTAAGAATACTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  1:924344/141‑1 (MQ=255)                                                                           atggAACATAAATTTCAGAATTTTGTAAAAAGATCACATTAACT‑TTAAAATTTAAACAAATTATAGTGTGATTTACTACTTTATAACATCTATACATAATGTGAAAGAATTCTTAAAAATACAATTAAATCTCGGTGtaat                                                                              <  1:513563/138‑1 (MQ=255)                                                                           agCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaat                                                                              <  1:10219/140‑1 (MQ=255)                                                                            gCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCtt                                                                     >  2:812919/1‑149 (MQ=255)                                                                            gCGAACATAAATTTCAGAATATTGTAAAAATATCACAATATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTATAAATACAATTAAATATCGGTGtaata                                                                             <  1:715705/141‑1 (MQ=255)                                                                             ttaaCATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaataa                                                                            <  1:586832/139‑1 (MQ=255)                                                                             cGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaataa                                                                            <  1:261000/141‑1 (MQ=255)                                                                               aaCATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAAt                                                                          <  1:1187781/141‑1 (MQ=255)                                                                               aaCATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAAt                                                                          >  1:551917/1‑141 (MQ=255)                                                                                aCATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATc                                                                         <  1:686187/141‑1 (MQ=255)                                                                                aCATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTtata                                                                 <  2:334693/149‑1 (MQ=255)                                                                                   tAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCt                                                                      >  1:1113300/1‑141 (MQ=255)                                                                                   tAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACaa                                                              >  2:612136/1‑148 (MQ=255)                                                                                   tAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACAt                                                              >  2:414620/1‑149 (MQ=255)                                                                                   tAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACAt                                                              >  2:348310/1‑149 (MQ=255)                                                                                   tAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACAt                                                              >  2:119244/1‑149 (MQ=255)                                                                                    aaaTTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAACTAAATATCGTTGTAATAAATCCCTTTATACATa                                                             <  2:469345/149‑1 (MQ=255)                                                                                         tcataaatttGTAAAAATATCACACTATAT‑TTATCCTTTACACAAAAGATAGTGTGATATACTAATTTATAACATCTATACAGAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGt                                                        <  2:77250/141‑1 (MQ=255)                                                                                         taaaaataaagaaaaaaTATCACACTATAT‑TTATCATTTAGACAAAATATAGTTTTATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATAc                                                                <  1:658003/129‑1 (MQ=255)                                                                                          cAGAATATCGTAAAAATATCACACTACAA‑TGAACATTTAGACAAAATATAGTGGGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGtt                                                       <  2:803942/149‑1 (MQ=255)                                                                                           aGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTg                                                      <  2:128271/149‑1 (MQ=255)                                                                                           aGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATAAAAATTGCGTGTAATAAATCCCTTTATACATAGGAGTTg                                                      <  2:930305/149‑1 (MQ=255)                                                                                            aaaTATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGt                                                     <  2:682841/148‑1 (MQ=255)                                                                                             actatTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAATAATTTTTAAAAGTAAGATTAAATATCGTTGTAATAAATCCCTGTATACATAGGAGTTGta                                                    <  2:685661/147‑1 (MQ=255)                                                                                               tagtGTAAAAATATCCCACTATAT‑TTATCATTTAGACAAAATATAGTGCGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCTCTTTATACATAGGAGTTGtata                                                  <  2:499485/146‑1 (MQ=255)                                                                                                atTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGCTGTAATAAATCCCTTTATACATAGGAg                                                         >  1:246001/1‑141 (MQ=255)                                                                                                     aaacaTATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaa                                            <  2:586136/149‑1 (MQ=255)                                                                                                     aaaaaTATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaa                                            <  2:729525/149‑1 (MQ=255)                                                                                                      aaaaTATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaaa                                           >  2:340928/1‑149 (MQ=255)                                                                                                        aaTATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACt                                         <  2:29051/149‑1 (MQ=255)                                                                                                          tatCACACTATAT‑TTATCATTTCGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACAt                                               <  1:378551/141‑1 (MQ=255)                                                                                                             cacaCTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATa                                    <  2:30622/149‑1 (MQ=255)                                                                                                              acacTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGaaa                                           >  1:749914/1‑141 (MQ=255)                                                                                                                              tttAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTaaagaatagttat                    <  2:391309/149‑13 (MQ=255)                                                                                                                                   aCAAAATATAGTGTGATATACTAAGTTATGACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTaaaa               >  2:480138/1‑149 (MQ=255)                                                                                                                                       aaTATAGTGTGATATACGAATTTATAACATCTATACATAATGTTAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAAACCCTTTTTACATAGGAGTTGTATACATGAAAATAAATAACTATTCTTTAAAAGtt                   >  1:577749/1‑141 (MQ=255)                                                                                                                                          ataGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTaaa                <  1:859579/141‑1 (MQ=255)                                                                                                                                           taGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAATATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAacaaacaa       <  2:920280/149‑1 (MQ=255)                                                                                                                                               gtgATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAACAAACAACTAg   >  2:602825/1‑149 (MQ=255)                                                                                                                                               gtgATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAACAAACAACTAg   >  2:817326/1‑149 (MQ=255)                                                                                                                                               gtgATATACTAATTTATAACATCTATACATAAAGTGAAAGAATTTTAAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAACAaacaacaat   >  2:601359/1‑146 (MQ=255)                                                                                                                                                tgATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATCCATGAAACTACATAACTATTCCTTAAAAGTTGAacacaaa          >  1:345402/1‑141 (MQ=255)                                                                                                                                                tgATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAaaacaaa          >  1:800554/1‑141 (MQ=255)                                                                                                                                                tgATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGGTAAAAACAAACAACTAGt  <  2:679077/149‑1 (MQ=255)                                                                                                                                                   tataCTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACGATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAacaaacaa       <  1:1175307/141‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                               CAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAT‑TTATCATTTAGACAAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTATACATGAAACTAAATAACTATTCTTTAAAAGTTAAAAACAAACAACTAGT  >  CP000730/2661684‑2661974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.