New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	52495 =	75 (0.790)	134 (1.420) +T	4/284	10.9	61.9%	intergenic (+105/‑568)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
	?	CP000730	= 52988	91 (0.960)					intergenic (+598/‑75)	USA300HOU_0043/USA300HOU_0044	hypothetical membrane protein/possible transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.

ATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGGTCTACGT  >  CP000730/52843‑53135                                                                                                                                                  |                                                                                                                                                    aTCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATAATCGTAGTAATCGCGCGAAAATcgcg                                                                                                                                                  >  2:388234/1‑149 (MQ=17)    ttttGAAATCATGGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGa                                                                                                                                               <  2:120182/148‑1 (MQ=17)      ttGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGGGaaa                                                                                                                                             >  2:162648/1‑149 (MQ=17)       tGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGACATCAGCGTAGTAATCGCGCGAAAATCGCGTGAAAt                                                                                                                                            <  2:834095/149‑1 (MQ=17)        gAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATcgc                                                                                                                                                   <  1:822029/141‑1 (MQ=32)        gAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATa                                                                                                                                           <  2:557673/149‑1 (MQ=32)          aaTCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACt                                                                                                                                         <  2:107244/149‑1 (MQ=33)          aaTCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACt                                                                                                                                         <  2:487176/149‑1 (MQ=33)            tcatcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGAGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAGATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTAt                                                                                                                                       >  2:832567/1‑149 (MQ=25)                 gtagtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGGGGAATCGTTTGAAAAAATCGTAGTAATCGGGGGAAAATCGCGCGaaaaaa                                                                                                                                          >  1:240035/1‑138 (MQ=11)                 gtagtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAGATAATCGAAGGAAGAGCGCGAAAATCGCGTGAAATaa                                                                                                                                          >  1:1040072/1‑140 (MQ=11)                      aaTCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGTAAATCGCGTGAAATACTATGGTAGACGGt                                                                                                                             <  2:480925/149‑1 (MQ=255)                      aaTCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGt                                                                                                                             <  2:752685/149‑1 (MQ=255)                      aaTCGCCCGAAAATCGCGGGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGt                                                                                                                             <  2:375101/149‑1 (MQ=255)                          gcgcgAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGa                                                                                                                                 <  1:900824/141‑1 (MQ=25)                           cgcgACACTCGCGGGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAg                                                                                                                        <  2:222108/149‑1 (MQ=255)                            gcgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACg                                                                                                                               <  1:981534/141‑1 (MQ=255)                            gcgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGt                                                                                                                       <  2:572668/149‑1 (MQ=255)                             cgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGGGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAGTACTAAGGTAGACgg                                                                                                                              >  1:1077638/1‑141 (MQ=255)                             cgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATAGCGCGAAAATCGCGTGAAATAGTATGGTAGACgg                                                                                                                              >  1:626339/1‑141 (MQ=255)                                aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGGATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGGGAAATACAAAGGTAGAGGGttt                                                                                                                           >  1:722220/1‑141 (MQ=14)                                   tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTaa                                                                                                                >  2:412040/1‑149 (MQ=255)                                    cgcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAAt                                                                                                               <  2:348765/149‑1 (MQ=255)                                      cgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATgg                                                                                                             <  2:901710/149‑1 (MQ=255)                                         gAAATAATCAGAGGAATCGTTTGAAATCTTCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAAGCGTTTGAAATCATCGTAGTAATCGTGCGAAAGTCACTTGAAATACAATGGTAGTCGTTTTTAGTAAATTAAtttagt                                                                                                          >  2:656714/1‑144 (MQ=14)                                           aataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTAAGTGGGATGGTTTGAGAAAAtcga                                                                                                                >  1:1064695/1‑138 (MQ=11)                                              aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATGGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATATGGTGGACGGTTTGAGAAAATTAATgg                                                                                                             >  1:148062/1‑141 (MQ=14)                                              aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTAtttt                                                                                                     <  2:932842/149‑1 (MQ=255)                                                tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAGTCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAGTTAATGGAGGATTTTaa                                                                                                   >  2:630637/1‑149 (MQ=255)                                                tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTaa                                                                                                   <  2:928760/149‑1 (MQ=255)                                                tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATAATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAAAGAAGTAGTGTaa                                                                                                   >  2:755447/1‑149 (MQ=17)                                                tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTaa                                                                                                   <  2:105497/149‑1 (MQ=255)                                                         tCGTTTGAAATCATAGTAGTAATCGCGCGAAAATCGCGTGAAATAATGTGGGGAGTCGTTTGATATCATTGTAGTAATCGCGCGATATTCGGGTGATGTAGTATGGTGGTTGGTTTGGGTAAGTTAATGGAGTGATTTact                                                                                                  >  1:45554/1‑139 (MQ=9)                                                           gTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGtt                                                                                        >  2:887071/1‑149 (MQ=255)                                                             ttGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTg                                                                                      <  2:725016/149‑1 (MQ=255)                                                                 aaTCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTggagg                                                                                  <  2:96882/149‑1 (MQ=255)                                                                    catcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAAt                                                                               >  2:96415/1‑149 (MQ=255)                                                                        gtagtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCg                                                                           <  2:630228/149‑1 (MQ=255)                                                                          agtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGtt                                                                         >  2:572654/1‑149 (MQ=255)                                                                            taATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAAt                                                                               >  1:195230/1‑141 (MQ=255)                                                                            taATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAAt                                                                               >  1:289292/1‑141 (MQ=255)                                                                            taATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGc                                                                       <  2:29123/149‑1 (MQ=255)                                                                                cgcgcgAAAAACGCGTTAAGTTATCAGAGGAATCGTTTGAAATTATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCg                                                                           <  1:485333/141‑1 (MQ=25)                                                                                 gcgcgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATagg                                                                  >  2:326467/1‑148 (MQ=255)                                                                                 gcgcgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATaga                                                                  <  2:703110/149‑1 (MQ=255)                                                                                 gcgcgAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATaga                                                                  <  2:503115/149‑1 (MQ=255)                                                                                 ccgcgAAAACCGCGGGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATaga                                                                  <  2:8965/148‑1 (MQ=255)                                                                                   gcgAAAAGCGCGTGAAACAATCAGAGGAATCGTTTGAAATCATCGTAGTCATCGCGTGACAATTGCGTGAAATCCTATGGTAGACGGTTTCAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTg                                                                        <  1:33073/141‑1 (MQ=25)                                                                                     gAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGGAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGaaa                                                              <  2:156046/149‑1 (MQ=255)                                                                                     gAAAAACGCCTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGaaa                                                              <  2:73837/149‑1 (MQ=255)                                                                                       aaaTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAAAGGAGGATTTTAATAGTTATGGTTTGGAGGAATTGCGTTgaaga                                                                    >  1:974693/1‑137 (MQ=255)                                                                                       aaaTCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAAAGGAGTTTTTTAATATTTATGGTTTGGAGGAATTGTGTTGCGTa                                                                    >  1:64484/1‑141 (MQ=25)                                                                                       aaaGCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGGTTGGAGGAATTGCGTTGCATa                                                                    >  1:604057/1‑141 (MQ=255)                                                                                         aTCGCGTGAAATAATCAGAGAAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTaa                                                          <  2:882087/149‑1 (MQ=255)                                                                                           cgcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAat                                                        <  2:306139/149‑1 (MQ=255)                                                                                           cgcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAat                                                        <  2:798555/149‑1 (MQ=255)                                                                                            gcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAata                                                       <  2:371746/149‑1 (MQ=255)                                                                                            gcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAata                                                       <  2:354956/149‑1 (MQ=255)                                                                                            gcgTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAata                                                       <  2:302635/149‑1 (MQ=255)                                                                                                gAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCCCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTa                                                           >  1:583809/1‑141 (MQ=255)                                                                                                  aataatCAGCGGAATCGTTTGAAATCATCGTAGTACTCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTCATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATaga                                                 <  2:311996/149‑1 (MQ=255)                                                                                                  aataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATaga                                                 <  2:392082/149‑1 (MQ=255)                                                                                                       tCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTTGATAGAGAAAGTAAATATATTGAGtata                                            >  2:256239/1‑149 (MQ=255)                                                                                                           agGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGaa                                        >  2:343900/1‑149 (MQ=255)                                                                                                                       aaaTCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAgg                            <  2:863255/149‑1 (MQ=255)                                                                                                                        aaTCATCGTAGTACTCGCGGGAAAAGCGCGTGGGATACTATGGTAGAGGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAGATCAc                                   <  1:165500/141‑1 (MQ=255)                                                                                                                        aaTCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGa                           <  2:416313/149‑1 (MQ=255)                                                                                                                         atcatcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATACGAAATCACGAAAAGGAt                          <  2:686396/149‑1 (MQ=255)                                                                                                                            atcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTAAGTAAATTAATAGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTAt                       <  2:920655/149‑1 (MQ=255)                                                                                                                            atcGGAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaa                               <  1:797693/141‑1 (MQ=255)                                                                                                                             tcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAGATCACGaaaa                              <  1:807554/141‑1 (MQ=255)                                                                                                                             tcGTAGTAATCGCGCGAAAATCGCGTGAAATAATATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaaa                              <  1:49680/141‑1 (MQ=255)                                                                                                                             gcGTAGTAATCGCGCGAAAATCGCGGGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAACTATATAGAGTATAAGAATTCACGaaaa                              <  1:698496/140‑1 (MQ=255)                                                                                                                              cGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGAAGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATTGAGTATAAGAAATTACGAAAAg                             >  1:1184730/1‑141 (MQ=255)                                                                                                                                  gtaATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGAtt                         <  1:759670/141‑1 (MQ=255)                                                                                                                                   taATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTa                        >  1:344339/1‑141 (MQ=255)                                                                                                                                   taATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTa                        >  1:1115308/1‑141 (MQ=255)                                                                                                                                      tCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGatat             >  2:487076/1‑149 (MQ=255)                                                                                                                                        gcgtgAAAATCGCGTGAAATACTATGGGAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGCGTATAAGAAATCACGAAAAGGATTATCTAATGATAttt           <  2:501013/149‑1 (MQ=255)                                                                                                                                            gAAAATCGCGTGAAATACTATGGTAGACGGTTTAAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTACTGATATTTGGTc       <  2:638806/149‑1 (MQ=255)                                                                                                                                               aaTCGTGTGAAATCCTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATAtt            <  1:386344/141‑1 (MQ=255)                                                                                                                                               aaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATAtt            <  1:710565/141‑1 (MQ=255)                                                                                                                                               aaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGGTCTAc    <  2:309535/149‑1 (MQ=255)                                                                                                                                               aaTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGGTCTAc    <  2:139626/149‑1 (MQ=255)                                                                                                                                               aaTCGCGTGAAATACTATGGTAGACGCTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGATAAGGATTATCTAATGATATTTGGTCTAc    <  2:567031/149‑1 (MQ=255)                                                                                                                                                aTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGCACTAGCAAAAAGGATTATCTAATGATAttt           <  1:847074/141‑1 (MQ=255)                                                                                                                                                aTCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATAttt           <  1:218117/141‑1 (MQ=255)                                                                                                                                                 tCGCGTTAAATACTATGGTAGACGGTTTGAGTAAACTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGGTCTACGt  <  2:113403/149‑1 (MQ=255)                                                                                                                                                 tCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGGTCTACGt  <  2:937371/149‑1 (MQ=255)                                                                                                                                                 tCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATAGAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTg          >  1:32557/1‑141 (MQ=255)                                                                                                                                                 tCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTGTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTg          >  1:825122/1‑141 (MQ=255)                                                                                                                                                  |                                                                                                                                                    ATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGGTCTACGT  >  CP000730/52843‑53135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.