| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 52495 = | 94 (0.950) | 143 (1.450) +T |
5/256 | NT | 58.0% | intergenic (+105/‑568) | USA300HOU_0043/USA300HOU_0044 | hypothetical membrane protein/possible transcriptional regulator |
| ? | CP000730 | = 52988 | 115 (1.160) | intergenic (+598/‑75) | USA300HOU_0043/USA300HOU_0044 | hypothetical membrane protein/possible transcriptional regulator | |||||
Only 100 of 265 total aligned reads displayed.
TTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAA > CP000730/52355‑52633 | ttgttTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATcgc > 2:426425/1‑141 (MQ=255)ttgttTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATcgc > 1:815308/1‑141 (MQ=255) gttTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGt > 2:665762/1‑141 (MQ=255) ttttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa < 1:1118528/141‑1 (MQ=255) ctttAAGGCATATCATGCTTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaa > 2:1124822/2‑141 (MQ=255) tAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAaata > 1:547807/1‑141 (MQ=255) aaaGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAaataa > 1:180593/1‑141 (MQ=255) aGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATc < 1:684051/141‑1 (MQ=255) aatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcgcgtgaaataataaggggaatggtttggaataatcgtagtaatcgcgcgaaaatcaCGTAAAAAAATAaga < 2:232749‑M1/15‑1 (MQ=255) gATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGaa > 2:603944/1‑141 (MQ=255) aTGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAAt > 2:607014/1‑141 (MQ=255) ccTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGt < 2:125921/141‑1 (MQ=255) ccTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGt < 2:705906/141‑1 (MQ=255) aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaa < 1:503273/141‑1 (MQ=255) aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaa < 2:393553/141‑1 (MQ=255) aGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaaa > 1:45542/1‑141 (MQ=255) gAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAat > 2:440105/1‑141 (MQ=255) tAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAatcatc > 1:165263/1‑141 (MQ=255) gTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt > 2:297273/1‑141 (MQ=255) tttCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtagt > 1:300571/1‑141 (MQ=255) aaaaTATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAATTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgc < 2:1026785/141‑1 (MQ=255) aaaaTATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgc < 2:271804/141‑1 (MQ=255) aaaaTATGTATAGATATAATTAAAATTAAGTAATAATAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAATAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgc < 2:789899/141‑1 (MQ=255) taGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg > 1:653326/1‑141 (MQ=255) atatAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGa > 1:533052/1‑141 (MQ=255) tataATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 2:649566/141‑1 (MQ=255) ataATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaaa < 1:1028463/141‑1 (MQ=255) aattaattAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 2:55542/141‑1 (MQ=255) cttttggggacatcgcgggaaataatcagaggaaacgtttgaaaacatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCagag > 2:860847‑M1/71‑141 (MQ=255) atggagtgaaaatcgggtgagataatcaggggaatcgtttgaagtcatcgtagtaatggcgcgaaaatcaCGTGAAATAATCAGAGGATTCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCagag > 2:165263‑M1/71‑141 (MQ=255) aattaatATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGaa < 1:569686/141‑1 (MQ=255) aatATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGt < 1:1192537/141‑1 (MQ=255) atatTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt < 1:61169/141‑1 (MQ=255) aaatcgcgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt > 2:160510‑M1/62‑141 (MQ=255) taaagtgagataatcaagggaaacgtttgaagaaatagtagaaatcgagtgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGaa > 2:736528‑M1/59‑141 (MQ=255) cgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGGATCGTTTGAAatc < 1:950462‑M1/86‑1 (MQ=255) gtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAATAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatca < 2:780733‑M1/87‑1 (MQ=255) gaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatcatc > 1:986389‑M1/53‑141 (MQ=255) ataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATAAAAGGAATCGGTTGAATTCATTGAAGTAAGCGCGCGAAAATCACGGGAAATAATCAGAGGAATCGTTTGAAATCATCgta < 1:113111‑M1/92‑1 (MQ=255) atcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc > 1:864553‑M1/47‑91 (MQ=255) atcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc < 2:864553‑M1/45‑1 (MQ=255) tcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaaacaCGGGAAATAATCAGAGGAGTCGTTTGAAATCATCGTAGTAATCGCGCGACAATCACGTGAAAAAAGAAGAGGAATCGTTTGAAATCatcgtagcaa < 2:917314‑M1/96‑4 (MQ=255) agaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCagag < 2:1048850‑M1/16‑1 (MQ=255) agaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGaa < 1:388170‑M1/83‑1 (MQ=255) agaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATc < 1:439179‑M1/98‑1 (MQ=255) agacgaaacgtttgaaatcaccgtagaaatcttgagaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATc > 2:206141‑M1/44‑141 (MQ=255) gaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCg < 1:116989‑M1/2‑1 (MQ=255) gaggaatcgtttgaaaacacggtaaaaatcgcgagaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGGGGAATCGTTTGAAATCATCGTAGTAATcg > 1:665762‑M1/43‑141 (MQ=255) aggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc < 1:973649‑M1/100‑1 (MQ=255) aggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc > 2:238443‑M1/42‑141 (MQ=255) ggaatcgtttgaaatcatcgtagtaatcgggcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcg > 1:601087‑M1/41‑141 (MQ=255) gaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgc > 1:473757‑M1/40‑141 (MQ=255) aatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 1:1048456‑M1/61‑1 (MQ=255) aatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcg < 1:588822‑M1/103‑1 (MQ=255) aatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcg > 1:777846‑M1/39‑141 (MQ=255) atcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa > 1:915573‑M1/38‑141 (MQ=255) aaagtttgaagatatcggaataatcgtgtgaaaatcaCGTTAAATAATGAGAGGAATCGTTTTAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa > 2:588337‑M1/38‑141 (MQ=255) tcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGttt < 1:637893‑M1/25‑1 (MQ=255) aaTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaa > 2:1151348/1‑141 (MQ=255) cgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGa < 1:87454‑M1/5‑1 (MQ=255) gtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGaa > 1:753188‑M1/35‑40 (MQ=255) gtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGaa < 2:753188‑M1/6‑1 (MQ=255) gtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGaaa > 1:427068‑M1/35‑63 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTg < 2:398867‑M1/26‑1 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAatcatc > 1:1146666‑M1/34‑67 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgc > 2:344372‑M1/34‑80 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAt < 1:238443‑M1/108‑1 (MQ=255) gaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGaaa < 1:995582‑M1/29‑1 (MQ=255) cTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg > 1:559195/1‑141 (MQ=255) catcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTg < 1:605742‑M1/26‑1 (MQ=255) atcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaaa > 1:1081356‑M1/25‑141 (MQ=255) tcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaaa < 2:575268‑M1/62‑1 (MQ=255) aCGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAaata > 1:496320/1‑141 (MQ=255) gtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCg < 1:1003536‑M1/22‑1 (MQ=255) agAAAAATGTTGTATAAATCGCGAGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAaataa < 1:230713/140‑1 (MQ=255) tagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcg < 2:384429‑M1/46‑1 (MQ=255) tagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcg > 1:384429‑M1/21‑66 (MQ=255) tagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGTATCGTATGAAAACATCGTAGTAATGGCTCGAAAATTaggtgaataagt < 2:544884‑M1/121‑6 (MQ=255) agtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa < 2:874168‑M1/49‑1 (MQ=255) aaaaaTGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATc > 1:726908/1‑141 (MQ=255) gtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAatcatc > 2:833741‑M1/19‑52 (MQ=255) gtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAatcatc < 1:833741‑M1/34‑1 (MQ=255) gtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTgaaataataa < 2:988374‑M1/123‑3 (MQ=255) taatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa > 2:492819‑M1/18‑121 (MQ=255) attgagcgaaaatcaCGTAAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCagag > 2:45542‑M1/16‑141 (MQ=255) atcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgc > 2:637741‑M1/16‑62 (MQ=255) atcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg < 1:692933‑M1/59‑1 (MQ=255) gcgcgaaaatcaCGTGAAATAATCAGAGGAATCGtt < 1:1189488‑M1/24‑1 (MQ=255) gcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGaa > 1:426315‑M1/13‑141 (MQ=255) tgtgGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt > 1:206141/1‑141 (MQ=37) cgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGaa < 1:158489‑M1/28‑1 (MQ=255) cgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATGGCGAGAAAAAGACGTGAAATAAGCAGAGGAATCGTTTGAGATCATCGTAGTAATCGAGAGAAAAACAAGTGAAAGAATCAGAGGAAt < 2:654293‑M1/130‑1 (MQ=255) gAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt < 1:360569/141‑1 (MQ=33) aaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGGGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt > 1:297273‑M1/7‑141 (MQ=255) aaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaaa < 2:965393‑M1/107‑1 (MQ=255) aaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt > 2:546974‑M1/7‑141 (MQ=255) aatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAAt < 1:785074‑M1/75‑1 (MQ=255) aatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcattactgcacctgg < 1:484448‑M1/136‑14 (MQ=255) tcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaaa < 1:6289‑M1/117‑1 (MQ=255) aCGTGAAATAATCAGAGGAATCGTTTGAAATCATCg < 1:263532‑M1/35‑1 (MQ=255) | TTGTTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAA > CP000730/52355‑52633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |