BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	854380 =	84 (0.850)	7 (0.070)	6/246	NT	8.1%	intergenic (‑242/‑460)	USA300HOU_0798/USA300HOU_0799	nucleoside‑diphosphate sugar epimerase/hypothetical protein
*	?	CP000730	854405 =	79 (0.840)	7 (0.070)	6/246	NT	8.1%	intergenic (‑267/‑435)	USA300HOU_0798/USA300HOU_0799	nucleoside‑diphosphate sugar epimerase/hypothetical protein

Only 100 of 108 total aligned reads displayed.

TTTTTGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTAACACAAC  >  CP000730/854240‑854518

tttttGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTgg                                                                                                                                            >  1:942103/1‑141 (MQ=255)

tttttGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTgg                                                                                                                                            >  1:143840/1‑141 (MQ=255)

  tttGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGAc                                                                                                                                          >  1:1179584/1‑141 (MQ=255)

  gaaaattaaagcattggtttaagtgttgtgttaaaagtttttatgtttagattgttatattactatgtattcttaaatttgtttaaaaaattaatgctttaaattgatgtataatgggaataagaaataaataaaaacGAc                                                                                                                                          <  2:347776‑M1/3‑1 (MQ=255)

   ttGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGAcc                                                                                                                                         >  1:985989/1‑141 (MQ=255)

    tGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGAccc                                                                                                                                        >  2:975701/1‑141 (MQ=255)

    tGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGAccc                                                                                                                                        >  2:56623/1‑141 (MQ=255)

    tGAATTGTATTTTAATAAAAATGATATAAGATATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGAccc                                                                                                                                        >  2:1072565/1‑141 (MQ=255)

    aaattaaagcattggtttaagtgttgtgttaaaagtttttatgtttagattgttatattactatgtattcttaaatttgtttaaaaaattaatgctttaaattgatgtataatgggaataagaaataaataaaaacGAccc                                                                                                                                        <  2:848712‑M1/5‑1 (MQ=255)

       aTTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTa                                                                                                                                     >  1:307312/1‑141 (MQ=255)

       aTTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTa                                                                                                                                     >  1:169080/1‑141 (MQ=255)

          gTATTTTAATAAAAATGATATAAGTTATAATAAACGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGt                                                                                                                                  <  1:1104618/141‑1 (MQ=255)

           tATTTTAATAAAAATGATATAAGTTATAATAAAGGTGGACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGtt                                                                                                                                 <  2:436990/141‑1 (MQ=255)

            aTTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTa                                                                                                                                <  2:75274/141‑1 (MQ=255)

             ttttAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTGAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGCACgatta                                                                                                                               <  1:1106160/141‑5 (MQ=255)

             ttttAATAAAAATATTATTGGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTaa                                                                                                                               <  1:961334/141‑1 (MQ=255)

              tttAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGCACgattaa                                                                                                                              <  2:1156364/141‑6 (MQ=255)

               ttggtttaagtgttgtgttaaaagtttttatgtttagattgttatattactatgtattcttaaatttgtttaaaaaattaatgctttaaattgatgtataatgggaataagaaataaataaaaacGACCCGTACGTTAATc                                                                                                                             >  1:753789‑M1/126‑141 (MQ=255)

               ttAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGCACgattaac                                                                                                                             <  1:981377/141‑7 (MQ=255)

                 ggtttaagtgttgtgttaaaagtttttatgtttagattgttatattactatgtattcttaaatttgtttaaaaaattaatgctttaaattgctgtataatgggaataagaaataaataaaaacGACCCGTACGTTAATCGt                                                                                                                           >  2:85291‑M1/124‑141 (MQ=255)

                 aataaAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGt                                                                                                                           >  1:53342/1‑141 (MQ=255)

                 aataaAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGt                                                                                                                           >  1:573509/1‑141 (MQ=255)

                  ataaAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTg                                                                                                                          >  1:29478/1‑141 (MQ=255)

                    ttaagtgttgtgttaaaagtttttatgtttagattgttatattactatgtattcttaaatttgtttaaaaaattaatgctttaaattgatgtataatgggagtaagaaataaataaaaacGACCCGTACGTTAATCGTGCg                                                                                                                        >  2:1167561‑M1/121‑141 (MQ=255)

                    ttaagtgttgtgttaaaagttttgatgtttagattgttatattactatgtattcttaaatttgtttaaaaaattaatgctttaaattgatgtataatgggaataagaaataaataaaaacGACCCGTACGTTAATCGTGCg                                                                                                                        >  1:610396‑M1/121‑141 (MQ=255)

                      aaaTGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCggg                                                                                                                      <  1:29134/141‑1 (MQ=255)

                       aaTGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGt                                                                                                                     <  1:747740/141‑1 (MQ=255)

                        aTGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTc                                                                                                                    >  2:1108963/1‑141 (MQ=255)

                         tGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCTTGCGGGTCg                                                                                                                   <  1:1051867/141‑1 (MQ=255)

                           atatAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGtt                                                                                                                 >  2:985547/1‑141 (MQ=255)

                            tataAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACCAACGAAGGTAAAAATTTCACTCCCTTTAGGAGTGGACCCGTACGTATCTCGGGCGGGTCGttt                                                                                                                >  1:884016/1‑141 (MQ=255)

                                aGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTtttat                                                                                                            <  2:609280/141‑1 (MQ=255)

                                        taaAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCTGTACGTTAATCGTTCGGGTCGTTTTTATTTATTTCt                                                                                                    >  2:122115/1‑141 (MQ=255)

                                          aaGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTa                                                                                                  >  2:447966/1‑141 (MQ=255)

                                           aGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTAt                                                                                                 >  1:731736/1‑141 (MQ=255)

                                             gtgtACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTc                                                                                               >  1:140141/1‑141 (MQ=255)

                                                tACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCa                                                                                            >  2:312301/1‑141 (MQ=255)

                                                 aCCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCAt                                                                                           >  2:1095892/1‑141 (MQ=255)

                                                 aCCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCAt                                                                                           >  2:297155/1‑141 (MQ=255)

                                                 aCCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCAt                                                                                           >  1:358067/1‑141 (MQ=255)

                                                      cGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATAc                                                                                      <  1:680031/141‑1 (MQ=255)

                                                       gATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACa                                                                                     >  2:100966/1‑141 (MQ=255)

                                                         tAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATc                                                                                   >  1:695742/1‑141 (MQ=255)

                                                           aagAATAAACATCACTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGCCTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCaa                                                                                 <  2:344018/139‑1 (MQ=255)

                                                             gAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAAtt                                                                               >  1:141418/1‑141 (MQ=255)

                                                             gAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAAtt                                                                               >  1:482997/1‑141 (MQ=255)

                                                             gAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAAtt                                                                               >  1:786984/1‑141 (MQ=255)

                                                                     aTCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCAt                                                                       <  1:587914/141‑1 (MQ=255)

                                                                     aTCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCAt                                                                       <  2:787640/141‑1 (MQ=255)

                                                                      tctcTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCAtt                                                                      <  1:997740/141‑1 (MQ=255)

                                                                      tctcTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCAtt                                                                      >  2:17233/1‑141 (MQ=255)

                                                                           tAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCTTTTAGTAGTTGACTCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATGTAAAGCATTAAttt                                                                 >  1:420033/1‑141 (MQ=255)

                                                                            aaaaGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAAtttt                                                                >  1:107267/1‑141 (MQ=255)

                                                                             aaaGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACGCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAAttttt                                                               >  2:687721/1‑141 (MQ=255)

                                                                              ttttgtttaaaaaattaatgctttaaattgatgtatattggtaataataaataaataaaaacGACCCGCACGATTAACGTACCCGTCGTTTTTCTTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAAtttttt                                                              >  2:713342‑M1/63‑141 (MQ=255)

                                                                              aaGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAAtttttt                                                              >  2:1158868/1‑141 (MQ=255)

                                                                                 tATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTaaa                                                           >  2:906662/1‑141 (MQ=255)

                                                                                  aTGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAAc                                                          <  2:350905/141‑1 (MQ=255)

                                                                                   tgtgTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACa                                                         >  1:285344/1‑141 (MQ=255)

                                                                                   tgtgTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACa                                                         >  2:1059879/1‑141 (MQ=255)

                                                                                   tgtgTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACa                                                         >  2:242950/1‑141 (MQ=255)

                                                                                    gtgtAAAACCCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACaa                                                        >  1:1049103/1‑141 (MQ=255)

                                                                                     tgtAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTGTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACaaa                                                       <  1:952430/141‑1 (MQ=255)

                                                                                       tAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAAtt                                                     <  1:423208/141‑1 (MQ=255)

                                                                                        aaaaCGCTGCATGATACAAACGAAGGAAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAAttt                                                    <  2:842006/141‑1 (MQ=255)

                                                                                         aaaCGCTGCATGATACAAACGAAGGTAAAAATTTTTCTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTaaa                                                           <  1:312977/133‑1 (MQ=255)

                                                                                         aaaCGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTaaa                                                           >  2:312977/1‑133 (MQ=255)

                                                                                           aCGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAg                                                 <  2:624450/141‑1 (MQ=255)

                                                                                           aCGCTGCATGATACAAACGAAGGTAAAAAGTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAg                                                 <  2:8658/141‑1 (MQ=255)

                                                                                             gCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGaa                                               <  2:1067731/141‑1 (MQ=255)

                                                                                                    gATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTATAGCATTAATTTTTTAAACAAATTTAAGAATACATAg                                        >  2:432791/1‑141 (MQ=255)

                                                                                                       aCAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTaa                                     <  1:1145601/141‑1 (MQ=255)

                                                                                                         ttgatgtataatgggaataagaaataaataaaaacGACCCGTACGTTAATCGTg                                                                                                                          <  2:857415‑M1/19‑1 (MQ=255)

                                                                                                         aaaCGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAata                                   >  2:470784/1‑141 (MQ=255)

                                                                                                          aaCGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAatat                                  >  2:957004/1‑141 (MQ=255)

                                                                                                           aCGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAAtata                                 <  2:583755/141‑1 (MQ=255)

                                                                                                            cGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATaa                                >  1:935474/1‑141 (MQ=255)

                                                                                                            cGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATaa                                <  1:447377/141‑1 (MQ=255)

                                                                                                             gAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAAc                               >  1:841314/1‑141 (MQ=255)

                                                                                                             gAAGGTAAAAATTTGACTCCCGTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAAc                               <  1:407341/141‑1 (MQ=255)

                                                                                                               aGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACaa                             >  2:889518/1‑141 (MQ=255)

                                                                                                                  tAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCt                          >  1:997021/1‑141 (MQ=255)

                                                                                                                   aaaaaTTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTa                         >  1:506187/1‑141 (MQ=255)

                                                                                                                    aaaaTTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTaa                        >  2:1062034/1‑141 (MQ=255)

                                                                                                                      aaTTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAAc                      >  1:954141/1‑141 (MQ=255)

                                                                                                                      aaTTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAAc                      >  1:120036/1‑141 (MQ=255)

                                                                                                                       aTTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACa                     >  1:586039/1‑141 (MQ=255)

                                                                                                                        tttGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACAt                    <  1:128653/141‑1 (MQ=255)

                                                                                                                         ttGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATa                   <  2:822825/141‑1 (MQ=255)

                                                                                                                          tGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATaa                  <  1:915314/141‑1 (MQ=255)

                                                                                                                                ccTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACtt            <  2:573509/141‑1 (MQ=255)

                                                                                                                                  tttAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACtttt          <  2:803440/141‑1 (MQ=255)

                                                                                                                                  tttAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACtttt          <  2:608401/141‑1 (MQ=255)

                                                                                                                                     agtagtGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTaac       >  2:870387/1‑141 (MQ=255)

                                                                                                                                        agtGGAGCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCTCATTATACATAAATTTAAAGAATTAATTTTTTAAACAAATTTAAGAATACATGGTAATATAATAATATAAATATAAAAACTTTTaacaga    >  2:455042/1‑139 (MQ=255)

                                                                                                                                        agtGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTaacaca    <  2:684745/141‑1 (MQ=255)

                                                                                                                                        agtGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTaacaca    <  2:1099496/141‑1 (MQ=255)

                                                                                                                                         gtGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTaacacaa   >  2:221549/1‑141 (MQ=255)

                                                                                                                                         gtGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTaacacaa   >  1:610246/1‑141 (MQ=255)

                                                                                                                                          tGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTaacacaac  >  2:1023045/1‑141 (MQ=255)

TTTTTGAATTGTATTTTAATAAAAATGATATAAGTTATAATAAAGGTGTACCTTCGATAACGAATAAACATCTCTTAAAAGTATGTGTAAAACGCTGCATGATACAAACGAAGGTAAAAATTTGACTCCCTTTAGTAGTGGACCCGTACGTTAATCGTGCGGGTCGTTTTTATTTATTTCTTATTCCCATTATACATCAATTTAAAGCATTAATTTTTTAAACAAATTTAAGAATACATAGTAATATAACAATCTAAACATAAAAACTTTTAACACAAC  >  CP000730/854240‑854518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.