| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1443583 | 78 (0.790) | 4 (0.040) | 3/248 | NT | 7.2% | intergenic (‑156/+197) | USA300HOU_1341/brnQ2 | IS1272 transposase/LIVCS family branched chain amino acid:cation symporter |
| ? | CP000730 | 2317554 = | 28 (0.290) | intergenic (+207/+1909) | rhbC/asp23 | possible Iuc family aerobactin synthesis protein/alkaline shock protein 23 | |||||
TAGTTTAGTAGTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATATTTTCTAATTGAAA > CP000730/1443445‑1443722 | tagtttagtAGTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACta < 1:541518‑M1/141‑3 (MQ=255) gtttagtAGTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACgtag > 1:1103691/1‑141 (MQ=255) gtttagtAGTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTCTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACgtag > 2:155904/1‑141 (MQ=255) tagtagTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTAt < 1:1082807/141‑1 (MQ=255) tagtagTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTAt < 1:376712/141‑1 (MQ=255) tagtagTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTAt < 1:1152354/141‑1 (MQ=255) gtagtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAGGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTa < 2:245257/141‑1 (MQ=255) gtagtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTTAAAGGAAAAGTACACGATAATACGTAGTATTa > 2:536261/1‑141 (MQ=255) gtagtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACtacgtatta > 2:366067‑M1/1‑132 (MQ=255) gtagtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTa < 1:990940/141‑1 (MQ=255) tagtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTaa < 2:1103994/141‑1 (MQ=255) tagtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTaa < 2:1149237/141‑1 (MQ=255) gtaTTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATg < 1:980597/141‑1 (MQ=255) tattaAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCgag < 1:553724/141‑1 (MQ=255) tattaAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCgag > 2:795576/1‑141 (MQ=255) aaaTTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTc < 2:994787/141‑1 (MQ=255) aTTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCt < 2:921398/141‑1 (MQ=255) aTTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCt > 2:642049/1‑141 (MQ=255) ttATACGAAGGGATCCAACACAGAAAATTAATTTTATTGAGGTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTg > 1:334494/1‑141 (MQ=255) tataCGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGa < 1:803996/141‑1 (MQ=255) tataCGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGa > 1:308073/1‑141 (MQ=255) ataCGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAg > 1:144882/1‑141 (MQ=255) aaCGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAgg < 2:358245/140‑1 (MQ=255) aGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGACGAGACTCCTGAGGGAGCa > 1:778278/1‑141 (MQ=255) gggATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAg > 1:505705/1‑141 (MQ=255) aTCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGc > 1:124994/1‑141 (MQ=40) cAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAg > 1:363289/1‑141 (MQ=39) cAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAg > 1:1050548/1‑141 (MQ=39) cAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAg > 1:448881/1‑141 (MQ=39) cacaGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCg < 1:196882/141‑1 (MQ=39) cccgAATATTTAATGAATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGa < 2:345561/138‑1 (MQ=11) acaGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGa < 2:763789/141‑1 (MQ=39) gAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGa < 1:433912/141‑1 (MQ=39) aaTTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCg > 1:691220/1‑141 (MQ=40) ttattttattGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAgg < 1:1118163/141‑1 (MQ=40) aaTTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCa < 2:143877/141‑1 (MQ=38) aTTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCAc > 2:744684/1‑141 (MQ=38) tttACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCAccc < 1:71451/141‑1 (MQ=39) tttACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCAccc < 1:165266/141‑1 (MQ=39) ttACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCAcccc > 2:567569/1‑140 (MQ=39) ttACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGGATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCt > 2:630521/1‑141 (MQ=38) aCATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAg < 2:388502/141‑1 (MQ=39) aCATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAg < 1:561486/141‑1 (MQ=39) aCATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAg < 1:86760/141‑1 (MQ=39) aaTTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGTCGGCAACCTAgg < 2:137938/140‑1 (MQ=255) tttATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGaa > 2:854423/1‑141 (MQ=39) tttATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGaa > 2:1180802/1‑141 (MQ=38) tttATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGaa < 1:119093/141‑1 (MQ=38) aTGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGc < 1:1154935/141‑1 (MQ=38) tgtgCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCg < 1:1184262/141‑1 (MQ=37) gCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAg < 2:809359/141‑1 (MQ=34) cAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGc < 1:31388/141‑1 (MQ=33) aaGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGcc > 2:955219/1‑141 (MQ=32) ttGGGCTAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAGTTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCAtt < 2:1138617/141‑1 (MQ=17) ttGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACATGTTAATACgtagtattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccat < 2:1155817‑M1/141‑85 (MQ=255) ttGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCAtt < 1:734292/141‑1 (MQ=32) ttGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCAtt < 2:1038765/141‑1 (MQ=32) ttGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCAtt < 2:906650/141‑1 (MQ=32) ggCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCaa < 2:334494/141‑1 (MQ=32) ggCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGAGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGCCACCCTAGGAAAGCGAAGCCATTCaa > 2:310812/1‑141 (MQ=17) gCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAAt > 1:337129/1‑141 (MQ=32) gaaaGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATa > 1:1131759/2‑141 (MQ=17) cAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTTCACGTGAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATa < 1:11214/141‑1 (MQ=17) cAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATa < 1:530733/141‑1 (MQ=32) aaaGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATAc < 2:810654/141‑1 (MQ=32) aGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGa > 1:37170/1‑141 (MQ=32) aGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGa < 2:394167/141‑1 (MQ=32) tgtCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacg < 1:949216‑M1/141‑95 (MQ=255) gtCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGt < 1:955086/141‑1 (MQ=32) tCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACttcgtattgaatggcttcgctttccttgggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacgta < 1:813451‑M1/141‑97 (MQ=255) tCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTa > 2:814746/1‑141 (MQ=32) tCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTa > 1:874813/1‑141 (MQ=32) cTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTAt < 1:212604/141‑1 (MQ=32) ttATTTTTTTATAGTTTGTCAAGGTAAAATCACACGTTAATTCGTAGTATTAATGGCGAGGCTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACGCTAGGAAAGCGAAGCCATGCAATACGAAGTAtt < 2:594064/141‑1 (MQ=11) ttttAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATaa > 1:1002869/1‑141 (MQ=32) ttAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAAt < 1:108362/141‑1 (MQ=32) ttAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAAt < 1:1147927/141‑1 (MQ=32) tAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTCATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATa > 1:1025371/1‑141 (MQ=17) tAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATa > 2:1113787/1‑141 (MQ=32) aaaGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATag < 1:45575/141‑1 (MQ=32) ttttttttCAAAGTAAAATTACACTTTAATACTTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAATACCGAGGCTGAGACGGTACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATaga > 2:393771/6‑141 (MQ=11) tttCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAca > 2:244274/1‑141 (MQ=32) cAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAcagca < 1:871715/141‑1 (MQ=32) aaaGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAcagcag > 1:273500/1‑141 (MQ=32) gTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTaa < 1:953609/141‑1 (MQ=32) aaTACttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacgtattaacatgtaattttacttttacatacttttaaaaaataa > 1:112955‑M1/1‑5 (MQ=255) aaTACttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacgtattaacatgtaattttacttttacatacttttaaaaaataa < 2:453052‑M1/141‑137 (MQ=255) aaTACttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacgtattaacatgtaattttacttttacatacttttaaaaaataa > 2:902821‑M1/1‑5 (MQ=255) aTACttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacgtattaacatgtaattttacttttacatacttttaaaaaataag < 2:605631‑M1/141‑138 (MQ=255) aCttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcgg > 2:388839‑M1/1‑2 (MQ=255) aCttcgtattgaatggcttcgctttcctagggtgccgtctcagcctcgg < 1:388839‑M1/49‑48 (MQ=255) aCttcggattgaatggcttcgctttcctagggtgccgtctcagcctcggtcttcgactggcactgctccctcaggagtctcgccattaatactacgtattaacatgtaattttacttttacatacttttaaaaaataagac < 2:33147‑M1/141‑140 (MQ=255) | TAGTTTAGTAGTATTTATTAAATTATACGAAGGGATCCAACACAGAAAATTTATTTTATTGAATTTTACATTTATGTGCAAGTTGGGCAAAGTGTCTTATTTTTTTAAAGTATTTCAAAGTAAAATTACACGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATATTTTCTAATTGAAA > CP000730/1443445‑1443722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |