New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	528464 =	34 (0.820)	3 (0.080)	3/230	NT	9.8%	intergenic (+5/‑162)	tatD/rnmV	TatD family deoxyribonuclease/hypothetical protein
	?	CP000730	528541 =	25 (0.670)					intergenic (+82/‑85)	tatD/rnmV	TatD family deoxyribonuclease/hypothetical protein

CCTACAATTCTTAATTTCAAAGCTCTAACCATCTCTATCGCACGTATTCCACATGCACGATATTTTAATTTAAAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/528613‑528464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctttctcacttttTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAATTGTAGGAAGGCGTTTTAAATGAAAATCAATGAGTTTATAGTTGTAGAAGGACGAGATGATACTGAGCG  >  CP000730/528541‑528675                                                                                                                                                                                                                                                                                               CCTACAATTCTTAATTTCAAAGCTCTAACCATCTCTATCGCACGTATTCCACATGCACGATATTTTAATTTAAAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTT                                                                                                                                                  >  1:420228/1‑141     CAATTCTTAATTTCAAAGCTCTAACCATCTCTATCGCACGTATTCCACATGCACGATATTTTAATTTAAAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCA                                                                                                                                              >  1:118885/1‑141     CAATTCTTAATTTCAAAGCTCTAACCATCTCTATCGCACGTATTCCACATGCACGATATTTTAATTTAAAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCA                                                                                                                                              >  1:153153/1‑141                                                                   AATTTAAAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGA                                                                                >  1:188001/1‑141                                                                            AAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAA                                                                       >  1:347188/1‑141                                                                                  GAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGAAGGTCCGAGCTTTGAAATTAAGAATTGTAG                                                                 >  1:353199/1‑141                                                                                                                                           TTTCTCACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAATTGTAGGAAGGCGTTTTAAATGAAAATCAATGAGTTTATAGTTGTAGAAGGACGAGATGATAC        <  1:44133/141‑1                                                                                                                                                CACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAATTGTAGGAAGGCGTTTTAAATGAAAATCAATGAGTTTATAGTTGTAGAAGGACGAGATGATACTGAGC   >  1:302868/1‑141                                                                                                                                                CACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAATTGTAGGAAGGCGTTTTAAATGAAAATCAATGAGTTTATAGTTGTAGAAGGACGAGATGATACTGAGC   >  1:302864/1‑141                                                                                                                                                 ACTTTTTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAATTGTAGGAAGGCGTTTTAAATGAAAATCAATGAGTTTATAGTTGTAGAAGGACGAGATGATACTGAGCG  >  2:342122/1‑141                                                                                                                                                                                                                                                                                               CCTACAATTCTTAATTTCAAAGCTCTAACCATCTCTATCGCACGTATTCCACATGCACGATATTTTAATTTAAAAAAGTGAGAAAGAACCATAGCATATTAAACGAATATAGCATCGTTTACATTTATGGCGGTGATCTTTCTCACTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/528613‑528464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctttctcacttttTTAAATTAAAATATCGTGCATGTGGAATACGTGCGATAGAGATGGTTAGAGCTTTGAAATTAAGAATTGTAGGAAGGCGTTTTAAATGAAAATCAATGAGTTTATAGTTGTAGAAGGACGAGATGATACTGAGCG  >  CP000730/528541‑528675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.