| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1903775 | 35 (0.840) | 2 (0.060) | 3/222 | NT | 5.6% | intergenic (+229/+66) | arsC2/gad | arsenate reductase (glutaredoxin)/possible mannosyl‑glycoprotein endo‑beta‑N‑glucosaminidase |
| ? | CP000730 | = 1903782 | 37 (1.030) | intergenic (+236/+59) | arsC2/gad | arsenate reductase (glutaredoxin)/possible mannosyl‑glycoprotein endo‑beta‑N‑glucosaminidase | |||||
CTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1903626‑1903775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagacgctttctatcTTGTTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTTTTA < CP000730/1903782‑1903648 CTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACG > 1:263116/1‑141 TAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCT < 1:483646/141‑1 AAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTT > 1:422877/1‑141 TGCATAAGAAATACTCATTTCTAAAGAAAAAGTAATTATTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAAGCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCTTGTTTTGATAGAAAGCGTCTT < 2:415416/141‑1 ATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTA > 1:496738/1‑141 ATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTC > 2:242527/1‑141 GCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGT < 1:222223/141‑1 GCTTTCTATCTTGTTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGT > 2:246696/1‑141 GCTTTCTATCTTATTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCACACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGT > 2:108560/1‑141 TTTCTATCTTGTTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTTT > 2:266685/1‑141 TCTATCTTGTTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTTTTA > 1:183427/1‑141 CTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1903626‑1903775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagacgctttctatcTTGTTTTGATAGAAAGCGTCTTTTTGCATTAGAGAAAACACATTGATTGATAATCCCACCAATGCAAGTGGGGCAGGACATCGATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTTTTA < CP000730/1903782‑1903648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |