| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1903775 | 35 (0.840) | 2 (0.060) | 3/222 | NT | 5.6% | intergenic (+229/+66) | arsC2/gad | arsenate reductase (glutaredoxin)/possible mannosyl‑glycoprotein endo‑beta‑N‑glucosaminidase |
| ? | CP000730 | = 1903782 | 37 (1.030) | intergenic (+236/+59) | arsC2/gad | arsenate reductase (glutaredoxin)/possible mannosyl‑glycoprotein endo‑beta‑N‑glucosaminidase | |||||
GGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCTTCAGTCTTCATGTT > CP000730/1903636‑1903912 | ggAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCa > 2:47019/1‑141 (MQ=255) tACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAAc < 2:378735/141‑1 (MQ=255) tAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAgataga > 1:183427‑M2/1‑135 (MQ=255) aaaCTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAgatagaaa > 2:266685‑M2/1‑133 (MQ=255) aCTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGTGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAATAAgatagaaagc > 2:108560‑M2/1‑131 (MQ=255) aCTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAgatagaaagc > 2:246696‑M2/1‑131 (MQ=255) aCTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAgatagaaagc < 1:222223‑M2/141‑11 (MQ=255) tGCATAAGAAATACTCATTTCTAAAGAAAAAGTAATTATTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAAGCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCttgttttgatagaaagcgtctt < 2:415416‑M1/141‑23 (MQ=255) gAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCTTGTTTTgatagaaagcgtctttttgcat > 2:242527‑M2/1‑119 (MQ=255) tACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTc > 2:62613/1‑141 (MQ=255) aCTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTcc > 1:346933/1‑141 (MQ=255) aCTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCATTTTATTATGtac > 2:240507/1‑139 (MQ=255) aTTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGt > 2:373746/1‑141 (MQ=255) tttCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTc > 1:403626/1‑141 (MQ=255) ttCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCa < 2:476936/141‑1 (MQ=255) tAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCTTGTTTTgatagaaagcgtctttttgcattagagaaaacacat > 1:496738‑M2/1‑105 (MQ=255) aaaGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATaaa < 2:259492/141‑1 (MQ=255) aGAAAAAGTGATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCATTCTATAAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATaaaaa < 1:74347/141‑1 (MQ=255) gAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAaac < 2:153066/141‑1 (MQ=255) gAAAAAGCAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTCATGCAAACAGACGCTTCCTATCAACCCACGATAGAACGCGTCTTTTTCGTATGTCCGAGTCCTaacaac > 2:105687/1‑141 (MQ=255) aaaaGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAaacaa > 2:371367/1‑141 (MQ=255) gTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCg > 2:90024/1‑141 (MQ=255) gTAATTCTTTATCGATGTACTGCCCCACTTGAATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAATACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCg < 2:41231/141‑1 (MQ=255) cgaacgtGCAGTAGTGGGCTGATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCa < 2:187299/135‑1 (MQ=255) cccACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGCCGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCa < 1:352530/141‑1 (MQ=255) cACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCaaa < 2:210092/141‑1 (MQ=255) ttGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGt > 1:25956/1‑141 (MQ=255) ttGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGt > 2:108612/1‑141 (MQ=255) ttGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGt > 1:241001/1‑141 (MQ=255) gCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGttt < 2:422877/141‑1 (MQ=255) ggtggGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTATATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCTAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGt < 2:279594/141‑1 (MQ=255) tcaatcaaTGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAATATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTtata > 1:429565/1‑141 (MQ=255) atcaatGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATacac < 2:190071/141‑1 (MQ=255) atGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCaaaacaagatagaaagcgtctttttgcattagagaaaacacattgattgataatcccaccaatgcaagtggggcaggacatcgataaagaattactttttcttta > 1:496738‑M1/1‑36 (MQ=255) atGTGGTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGCCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAg < 2:48662/141‑1 (MQ=255) tgtgTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCTAATGTTTACTGTCATCTTTATACACAAAGt > 2:244914/1‑141 (MQ=255) ttttCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTAttt < 1:458500/141‑1 (MQ=255) ttCTCTAATGCAAAAAGACGTTTTCTATGAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTTCTGTCATCTTTATACACAAAGTATTTGa < 2:376795/141‑1 (MQ=255) ctctAATGCAAAAAGACGCTTTCTAACAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAg < 1:149119/141‑1 (MQ=255) tctAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGGGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGt < 1:46879/141‑1 (MQ=255) ctAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTa > 1:506159/1‑141 (MQ=255) tAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTAt < 1:102722/141‑1 (MQ=255) aTGCAAAAAGACGCTTTCTATCaaaacaagatagaaagcgtctttttgcattagagaaaacacattgattgataatcccaccaatgcaagtggggcaggacatcgataaagaattactttttctttagaaattagtatttc > 2:242527‑M1/1‑22 (MQ=255) aaaaGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCtt > 1:143826/1‑141 (MQ=255) aaaaGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCtt > 2:468760/1‑141 (MQ=255) aaGACGCTTTCTATCAAAACAAgatagaaagcgtctttttgcattagagaaaacacattgcttgataatcccaccaatgcaagtggggcaggacatcgataaataattactttttctttagaaatgagtatttcttatgca < 2:415416‑M2/141‑120 (MQ=255) aCGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCTTCAGTc < 1:429320/141‑1 (MQ=255) gCTTTCTATCttgttttgatagaaagcgtctttttgcattagagaaaacacattgattgataatcccaccaatgcaagtggggcaggacatcgataaagaattactttttctttagaaattagtatttcttatgcatgagt > 2:246696‑M1/1‑10 (MQ=255) gCTTTCTATCttgttttgatagaaagcgtctttttgcattagagaaaacacattgattgataatcccaccaatgcaagtggggcaggacatcgataaagaattactttttctttagaaattagtatttcttatgcatgagt < 1:222223‑M1/141‑132 (MQ=255) gCTTTCTATCttattttgatagaaagcgtctttttgcattagagaaaacacattgattgataatcacaccaatgcaagtggggcaggacatcgataaagaattactttttctttagaaattagtatttcttatgcatgagt > 2:108560‑M1/1‑10 (MQ=255) cTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCTTCAGTCTTc > 1:288116/1‑141 (MQ=255) tttCTATCttgttttgatagaaagcgtctttttgcattagagaaaacacattgattgataatcccaccaatgcaagtggggcaggacatcgataaagaattactttttctttagaaattagtatttcttatgcatgagttt > 2:266685‑M1/1‑8 (MQ=255) tCTATCttgttttgatagaaagcgtctttttgcattagagaaaacacattgattgataatcccaccaatgcaagtggggcaggacatcgataaagaattactttttctttagaaattagtatttcttatgcatgagtttta > 1:183427‑M1/1‑6 (MQ=255) tATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCTTCAGTCTTCATGtt < 1:195839/141‑1 (MQ=255) aaacAAAACACGCAAGAAGGCGTCTTGTTATGATTTCCGAGCCATAATAACAACGCGTTGCTTATCAAATTACTTATTCAAATGTTTACTGTCACCTTTGTACACAAAGTATTTGAAGTATTTTCCTTCAGTCTTCATGtt < 2:358205/138‑1 (MQ=255) | GGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAGAAAAAGTAATTCTTTATCGATGTCCTGCCCCACTTGCATTGGTGGGATTATCAATCAATGTGTTTTCTCTAATGCAAAAAGACGCTTTCTATCAAAACAAGATAGAAAGCGTCTTTTTAGTATGTCCGAGTCATAAAAACAACTCGTAGCTTATCAAATTACTTATTCAAATGTTTACTGTCATCTTTATACACAAAGTATTTGAAGTATTTTCCTTCAGTCTTCATGTT > CP000730/1903636‑1903912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |