New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1217678 =69 (0.760)5 (0.060) 4/246 12.2 8.3% intergenic (+7/‑430) USA300HOU_1144/USA300HOU_1145 hypothetical protein/possible 3‑demethylubiquinone‑9 3‑methyltransferase
?CP000730 1217746 = 49 (0.610)intergenic (+75/‑362) USA300HOU_1144/USA300HOU_1145 hypothetical protein/possible 3‑demethylubiquinone‑9 3‑methyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTAGTCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGAGTAA  >  CP000730/1217546‑1217813
                                                                                                                                    |                                                                                                                                       
agtagtCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCtat                                                                                                                                 >  1:257958/1‑141 (MQ=255)
agtagtCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCtat                                                                                                                                 >  2:243115/1‑141 (MQ=255)
  tagtCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAg                                                                                                                               >  2:516243/1‑141 (MQ=255)
    gtCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAgtg                                                                                                                             <  1:192758/141‑1 (MQ=255)
    gtCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAgtg                                                                                                                             >  2:134667/1‑141 (MQ=255)
     tCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAgtgt                                                                                                                            >  1:605331/1‑141 (MQ=255)
       aCGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGttt                                                                                                                          <  1:666528/141‑1 (MQ=255)
             tCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATc                                                                                                                    >  2:596686/1‑141 (MQ=255)
             tCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATc                                                                                                                    <  2:90325/141‑1 (MQ=255)
             tCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATc                                                                                                                    >  2:596800/1‑141 (MQ=255)
             tCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTCAAAAACAAAAAAGCTATAGTGTTTAATATc                                                                                                                    >  2:596691/1‑141 (MQ=255)
              cgacgaAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCa                                                                                                                   <  1:335565/141‑1 (MQ=255)
                  gaAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAgggg                                                                                                               <  2:663885/141‑1 (MQ=255)
                         cAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTa                                                                                                        >  1:355811/1‑141 (MQ=255)
                           aCGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAAc                                                                                                      >  1:651336/1‑141 (MQ=255)
                            agAAGCAAAAACATATAAAAAAAAAAACAACAATAGAACAAAATGATGATTTATTTAAACATGTAAAAGATATATTACGTAAACAAGAACAAAAAAAAAAAAAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAAcc                                                                                                     <  2:1021474/140‑1 (MQ=255)
                             gAAGCAAAAACATATAAAAAATAAAACAACTATAGGACATAATGATGATTTATTAAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCg                                                                                                    >  2:312703/1‑141 (MQ=255)
                              aaGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGc                                                                                                   <  1:808783/141‑1 (MQ=255)
                                gCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCAt                                                                                                 >  2:688491/1‑141 (MQ=255)
                                gCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCAt                                                                                                 <  2:109391/141‑1 (MQ=255)
                                  aaaaaCATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTATAATATCAAGGGCTGCTTAACCGCATcc                                                                                               >  1:176649/1‑141 (MQ=255)
                                   aaaaCATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCg                                                                                              >  2:100350/1‑141 (MQ=255)
                                   aaaaCATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGAATCCg                                                                                              >  2:343712/1‑141 (MQ=255)
                                         tataAACAATAAAACAAGTCGAGAACGTTATAATGATTTATTTAAACAAGTAAAGGATATATTACGTAAACAAGAACAAATATAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATAtt                                                                                        <  1:489360/141‑1 (MQ=255)
                                            aaaaaaTAAAACAACTGTAGATAATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAAAAAAAAAAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACa                                                                                     <  2:105405/141‑1 (MQ=255)
                                            aaaaaaTAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACa                                                                                     <  1:144901/141‑1 (MQ=255)
                                                 aTAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAacac                                                                                >  2:713941/1‑141 (MQ=255)
                                                   aaaaCAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACta                                                                              <  1:275027/141‑1 (MQ=255)
                                                    aaaCAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACtat                                                                             >  1:554314/1‑141 (MQ=255)
                                                    aaaCAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACtat                                                                             <  1:1045467/141‑1 (MQ=255)
                                                    aaaCAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACtat                                                                             >  1:407514/1‑141 (MQ=255)
                                                     aacaacTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACtata                                                                            >  1:1029193/1‑141 (MQ=255)
                                                      acaacTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAg                                                                           >  1:8205/1‑141 (MQ=255)
                                                       caacTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGc                                                                          <  1:688491/141‑1 (MQ=255)
                                                        aacCATAGATCATCATGATGATTTATTTAAACATGTAAAACATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCt                                                                         <  1:493181/141‑1 (MQ=255)
                                                                aTCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTttattac                                                                 <  1:993957/141‑2 (MQ=255)
                                                                 tCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATtata                                                                <  1:306475/141‑1 (MQ=255)
                                                                              ttatttaAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGACTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATttatt                                                   >  2:250906/1‑141 (MQ=255)
                                                                                atttaAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAg                                                 >  2:244958/1‑141 (MQ=255)
                                                                                     aaCATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATCTAAAAAATTTATTACCGGAt                                            >  2:36511/1‑141 (MQ=255)
                                                                                       cATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATaa                                          <  1:247353/141‑1 (MQ=255)
                                                                                        aTGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAAt                                         >  2:6493/1‑141 (MQ=255)
                                                                                         tGTAAAGGATATATTACGTAAACAAGAACAAAAAAAAAAAAAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAAtt                                        <  2:765044/141‑1 (MQ=255)
                                                                                           tAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTaa                                      <  2:241762/141‑1 (MQ=255)
                                                                                            aaaGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAAc                                     <  1:255509/141‑1 (MQ=255)
                                                                                             aaGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACt                                    >  1:756529/1‑141 (MQ=255)
                                                                                               ggATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACttt                                  <  1:708059/141‑1 (MQ=255)
                                                                                                  tatatTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTttatt                               <  1:134667/141‑1 (MQ=255)
                                                                                                  tatagTACATAAACAAGAACAAATCAAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTttatt                               <  2:1042987/141‑1 (MQ=255)
                                                                                                     atTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCt                                                                         >  1:569651/1‑96 (MQ=255)
                                                                                                     atTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCt                                                                         <  2:569651/96‑1 (MQ=255)
                                                                                                           tAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATccaa                      <  1:643084/141‑1 (MQ=255)
                                                                                                             aaCAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATccaacc                    >  1:858371/1‑141 (MQ=255)
                                                                                                              aCAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATccaacca                   >  2:747419/1‑141 (MQ=255)
                                                                                                                  gAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGTGGATAATTAACTTTATTAAAATCCAACCAATTa               >  2:219355/1‑141 (MQ=255)
                                                                                                                  gAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTa               <  1:484466/141‑1 (MQ=255)
                                                                                                                   aaCAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTaa              >  2:969973/1‑141 (MQ=255)
                                                                                                                   aaCAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTaa              <  2:66129/141‑1 (MQ=255)
                                                                                                                   aaCAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTaa              <  1:236601/141‑1 (MQ=255)
                                                                                                                   aaCAAATAAAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGTCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTaa              <  2:680946/141‑1 (MQ=255)
                                                                                                                      aaaTTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGaa           <  2:685290/141‑1 (MQ=255)
                                                                                                                      aaaTTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGaa           >  2:1016078/1‑141 (MQ=255)
                                                                                                                         tttAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATAc        >  1:430445/1‑141 (MQ=255)
                                                                                                                         tttAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAAACGCATCAGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATAc        <  2:176649/141‑1 (MQ=255)
                                                                                                                           tAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGa      <  1:243115/141‑1 (MQ=255)
                                                                                                                             aaaaCAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGAGt    >  2:321766/1‑141 (MQ=255)
                                                                                                                               aaCAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGAGTaa  >  2:668479/1‑141 (MQ=255)
                                                                                                                               aaCAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGAGTaa  >  2:966958/1‑141 (MQ=255)
                                                                                                                               aaCAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGAGTaa  >  1:911829/1‑141 (MQ=255)
                                                                                                                                    |                                                                                                                                       
AGTAGTCACGATGTCGACGAAAGTTCAACGAAGCAAAAACATATAAAAAATAAAACAACTATAGATCATAATGATGATTTATTTAAACATGTAAAGGATATATTACGTAAACAAGAACAAATTTAAAAACAAAAAAGCTATAGTGTTTAATATCAGGGGCTGCTTAACCGCATCCGAATATTACAAACACTATAGCTTTTATTATATAAAAAATTTATTAGCGGATAATTAACTTTATTAAAATCCAACCAATTAAGAATACGAGTAA  >  CP000730/1217546‑1217813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.