| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2636366 | 48 (1.230) | 4 (0.110) | 4/256 | 5.2 | 9.2% | intergenic (‑419/+50) | fnbA/gntP | fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter |
| ? | CP000730 | = 2636392 | 35 (0.980) | intergenic (‑445/+24) | fnbA/gntP | fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATACTAAACGTTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2636216‑2636366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaacgtgtttTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTATTTTTATGCAGAAAATCGTCTGAAATACTCAGAATCCGAACGATATAAAAAGTATATTGGGTATTTTAGAGTGATGAAAGGCGTTTCAAGACATGTTTTTG < CP000730/2636392‑2636255 ATACTAAACTTTTCATAATTATCGGCTGTACAATACGCAAAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAAT < 2:423031/141‑1 AAACGTTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACG < 2:296430/141‑1 GTTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTAATTTATACTAGTTTCTGCATAAAAATAAACGTGTT < 1:215656/141‑1 TTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTT < 1:407843/141‑1 GCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTTTAGGTAATTGCA > 2:232310/1‑141 ACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGT < 1:46002/141‑1 TGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTA < 1:232310/141‑1 GTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTAT < 2:28196/141‑1 ACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTATTTTTATGCAGAAAATCGTCTGAAATACTCAGAATCCGAACGATATAAAAAGTATATTGGGTATTTTAGAGTGATGAAAGGCGTTTCAAGACATGT > 1:326581/1‑141 CGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTATTTTTATGCAGAAAATCGTCTGAAATACTCAGAATCCGAACGATATAAAAAGTATATTGGGTATTTTAGAGTGATGAAAGGCGTTTCAAGACATGTT > 2:136465/1‑141 GTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTATTTTTATGCAGAAAATCGTCTGAAATACTCAGAATCCGAACGATATAAAAAGTATATTGGGTATTTTAGAGTGATGAAAGGCGTTTCAAGACATGTTTTT > 2:183919/1‑141 TTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTATTTTTATGCAGAAAATCGTCTGAAATACTCAGAATCCGAACGATATAAAAAGTATATTGGGTATTTTAGAGTGATGAAAGGCGTTTCAAGACATGTTTTTt > 1:413529/1‑140 ATACTAAACGTTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2636216‑2636366‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaacgtgtttTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTATTTTTATGCAGAAAATCGTCTGAAATACTCAGAATCCGAACGATATAAAAAGTATATTGGGTATTTTAGAGTGATGAAAGGCGTTTCAAGACATGTTTTTG < CP000730/2636392‑2636255 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |