New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2636366	48 (1.230)	4 (0.110)	4/256	5.2	9.2%	intergenic (‑419/+50)	fnbA/gntP	fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter
	?	CP000730	= 2636392	35 (0.980)					intergenic (‑445/+24)	fnbA/gntP	fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAA  >  CP000730/2636255‑2636531                                                                                                                                          |                                                                                                                                            aaaaaaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTaaaaa                                                                                                                                          <  1:413529/140‑1 (MQ=255)  aaaaaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAac                                                                                                                                         <  2:183919/141‑1 (MQ=255)     aaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACg                                                                                                                                      <  2:136465/141‑1 (MQ=255)      aCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGt                                                                                                                                     <  1:326581/141‑1 (MQ=255)           tCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACt                                                                                                                                <  2:290917/141‑1 (MQ=255)            cTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACtt                                                                                                                               <  1:29433/141‑1 (MQ=255)             ttGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTa                                                                                                                              >  2:4147/1‑141 (MQ=255)                aaaCGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAata                                                                                                                           <  1:449374/141‑1 (MQ=255)                 aaCGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGGGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAatat                                                                                                                          <  1:7996/141‑1 (MQ=255)                      cTTTCATCACTCTAAAATACCCAATATACTTTTTTTTTTTTTTTTATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGt                                                                                                                     >  2:3182/1‑141 (MQ=255)                          catgaCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAGAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTaaa                                                                                                                 >  2:385713/1‑141 (MQ=255)                          aatcaCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACTATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAAGTACCTAAAAACACGTTTACTTAATATTTAGTTaaa                                                                                                                 <  2:355097/140‑1 (MQ=255)                                 ctAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACTTTTACTTAATATTTAGTTAAACAAATaa                                                                                                          <  1:237344/141‑1 (MQ=255)                                     aaTACCCAAGATTCTTTTTATATCGTTTGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGAAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTa                                                                                                      <  2:21731/141‑1 (MQ=255)                                           cAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAAt                                                                                                >  2:98080/1‑141 (MQ=255)                                                     tttATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAga                                                                                      >  2:275208/1‑141 (MQ=255)                                                     tttATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAga                                                                                      >  2:423747/1‑141 (MQ=255)                                                             gTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGTCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCt                                                                              <  2:61092/141‑1 (MQ=255)                                                                       tGAGTATTTCATACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGaaa                                                                    >  2:243779/1‑141 (MQ=255)                                                                               tCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGtt                                                            <  1:146702/141‑1 (MQ=255)                                                                                cAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGttt                                                           >  2:323770/1‑141 (MQ=255)                                                                                 aGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTc                                                          >  2:158157/1‑141 (MQ=255)                                                                                 aGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTc                                                          >  2:13521/1‑141 (MQ=255)                                                                                  gACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCt                                                         <  1:57399/141‑1 (MQ=255)                                                                                  gACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCt                                                         <  2:437942/141‑1 (MQ=255)                                                                                   aCGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCta                                                        <  1:4147/141‑1 (MQ=255)                                                                                     gATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCtaat                                                      <  1:286083/141‑1 (MQ=255)                                                                                        tttCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTaataat                                                   >  2:270298/1‑141 (MQ=255)                                                                                          tCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGa                                                 <  1:178205/141‑1 (MQ=255)                                                                                              cATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCAt                                             >  2:434401/1‑141 (MQ=255)                                                                                              cATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCAt                                             >  2:380962/1‑141 (MQ=255)                                                                                                    aaTAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAg                                       <  2:37865/141‑1 (MQ=255)                                                                                                       aaaCGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATTACCATGTTAAGagt                                    >  2:326643/1‑139 (MQ=255)                                                                                                          cGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGtt                                 <  1:13521/141‑1 (MQ=255)                                                                                                          cGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGtt                                 <  2:49208/141‑1 (MQ=255)                                                                                                          cGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGtt                                 <  1:364918/141‑1 (MQ=255)                                                                                                                          atatTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAAc                 >  1:214364/1‑141 (MQ=255)                                                                                                                                     aCCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCt      <  1:247840/141‑1 (MQ=255)                                                                                                                                         aaaaaCACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGAACATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTaa  >  1:4439/1‑141 (MQ=255)                                                                                                                                          |                                                                                                                                            CAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAA  >  CP000730/2636255‑2636531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.