| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2440041 = | 66 (1.210) | 5 (0.100) | 5/244 | 2.8 | 7.2% | intergenic (+2/+64) | USA300HOU_2302/glvC | hypothetical protein/PTS family arbutin‑salicin‑cellobiose (ASC) porter component IIBC |
| ? | CP000730 | 2440099 = | 69 (1.390) | intergenic (+60/+6) | USA300HOU_2302/glvC | hypothetical protein/PTS family arbutin‑salicin‑cellobiose (ASC) porter component IIBC | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTGAATAAGTCTCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTAC > CP000730/2439901‑2440179 | tcacgcatcaacaaatggcacacggattagtaaagagtggtaagagtatccaagttgtagtaggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaa < 2:142449‑M1/1‑1 (MQ=255)tcacgcatcaacaaatggcacacggattagtaaagagtggtaagagtatccaagttgtagtaggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaa < 1:579072‑M1/1‑1 (MQ=255) ttGAATAAGTCTCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCAtaataa < 2:117916/141‑1 (MQ=255) cacgcatcaacaaatggcacacggattagtaaagagtggtaagagtatccaagttgtagtaggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaaa > 1:347988‑M1/140‑141 (MQ=255) cacgcatcaacaaatggcacacggattagtaaagagtggtaagagtatccaagttgtagtaggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaaa < 2:537518‑M1/2‑1 (MQ=255) gAATAAGTCTCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATaaaa < 2:622859/141‑1 (MQ=255) caacaaatggcacacggattagtaaagagtggtaagagtatccaagttgtagtaggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGacac < 1:109488‑M1/9‑1 (MQ=255) aGTCTCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGacac > 1:207239/1‑141 (MQ=255) acaaatggcacacggattagtaaagagtggtatgagtatccaagctgtagtaagtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACAt < 2:175898‑M1/11‑1 (MQ=255) tGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCtata > 2:103701/1‑141 (MQ=255) tGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCtata > 2:386785/1‑141 (MQ=255) caTATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTTCCAATTATGGATCGTCATCTATGAGCAAAGCTCGTAGATCATAATAAAAGACACATCTATACgag > 1:324208/1‑140 (MQ=255) caTATTATATGTACGCCAGAAATATTTGCTAAATGGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATATATACgat > 2:365764/1‑141 (MQ=255) atatTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACgatg < 1:386785/141‑1 (MQ=255) tattatATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACgatga > 2:316189/1‑141 (MQ=255) ttatATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGACATCGCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATc > 1:175898/1‑141 (MQ=255) ttatATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATc > 1:273586/1‑141 (MQ=255) atGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCAttt > 2:290731/1‑141 (MQ=255) tGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTa < 1:347205/141‑1 (MQ=255) tACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACa > 2:231530/1‑141 (MQ=255) cAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGAt > 1:589603/1‑141 (MQ=255) aaTATTTGCTAAATTGTTACATACGATTGCAACTCGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCg < 1:594957/141‑1 (MQ=255) aaTATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCg < 1:269745/141‑1 (MQ=255) tatTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATACTAAAAGACACATCTATACGATGATCATTTACAATGATTGCGta < 2:641273/141‑1 (MQ=255) tGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGt > 1:38648/1‑141 (MQ=255) aaaTTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGAtg > 2:393730/1‑141 (MQ=255) ttgtagtaggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑t > 1:445664‑M1/87‑141 (MQ=255) taggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTc > 2:323064‑M1/81‑134 (MQ=255) taggtatgacagtaccacaagttcgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTc < 1:323064‑M1/54‑1 (MQ=255) aCGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTg > 2:423636/1‑141 (MQ=255) tGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGtatta < 2:611968/141‑1 (MQ=255) gCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGtattat > 2:147429/1‑141 (MQ=255) cAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTattatt > 1:240436/1‑141 (MQ=255) aaCTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTAttattt > 1:400747/1‑141 (MQ=255) aaCTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTAttattt > 2:642014/1‑141 (MQ=255) aGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCt < 1:577655/141‑1 (MQ=255) gAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCtt > 2:99649/1‑141 (MQ=255) aaTATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCg > 1:196551/1‑141 (MQ=255) atatCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCgg < 1:187952/141‑1 (MQ=255) tatCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGa < 2:93230/141‑1 (MQ=255) atCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGAc > 1:527352/1‑141 (MQ=255) tCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACg > 1:226281/1‑141 (MQ=255) tCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACg < 2:206054/141‑1 (MQ=255) gACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGAt > 2:412456/1‑141 (MQ=255) cgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGAtg < 1:407530‑M1/50‑1 (MQ=255) cgtgaagcatttgaacaaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGAtg > 2:407530‑M1/58‑107 (MQ=255) cATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTTGTATTATTTATCTTCGGACGAtt > 1:10041/1‑141 (MQ=255) aTTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGa < 1:398319/141‑1 (MQ=255) aTTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGa < 1:412456/141‑1 (MQ=255) cTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCaa < 2:207239/141‑1 (MQ=255) cTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCaa < 2:447074/141‑1 (MQ=255) cAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCAt < 1:3720/141‑1 (MQ=255) ttATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTg > 2:593869/1‑141 (MQ=255) tataGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATAGATCCTCAACCATTTGt > 1:169328/1‑141 (MQ=255) ataGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGtt > 2:153408/1‑141 (MQ=255) aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCAt > 2:201207/1‑134 (MQ=255) aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCAt < 1:201207/134‑1 (MQ=255) tCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAAt > 1:310987/1‑141 (MQ=255) aTCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTc < 2:240436/141‑1 (MQ=255) tGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGaa < 2:603300/141‑1 (MQ=255) tGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGaa > 1:637394/1‑141 (MQ=255) gCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACtt < 1:227969/141‑1 (MQ=255) cAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTtg > 2:479536/1‑141 (MQ=255) aaGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGAGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTtgtg > 1:175880/1‑141 (MQ=255) aGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTgg < 1:423636/141‑1 (MQ=255) cTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATTCTCTACAATTTGTTCAAATACTTCACGTACTTGTGGTa > 2:376519/1‑141 (MQ=255) cTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTa > 1:362947/1‑141 (MQ=255) tCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTAc > 2:444670/1‑141 (MQ=255) tCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTAc < 2:400747/141‑1 (MQ=255) gTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTg < 2:311324/141‑1 (MQ=255) tataTCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGt < 1:490058/141‑1 (MQ=255) tataTCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGt < 1:397542/141‑1 (MQ=255) tataTCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGt < 1:46201/141‑1 (MQ=255) atatCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATATTAGGACAATAGATGCTCAGCCAGTTGTTCAAATGCTTCACGAACTTGTGGTACTGTc > 1:258136/1‑141 (MQ=255) ataataAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATAcc > 2:579072/1‑141 (MQ=255) ataaAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACctac > 2:517028/1‑141 (MQ=255) ataaAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACctac < 1:390221/141‑1 (MQ=255) | GTTGAATAAGTCTCATGCACATATTATATGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATTCTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATCTATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATACCTAC > CP000730/2439901‑2440179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |