Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	58885	59035	151	6 [2]	[3] 5	USA300HOU_0049/USA300HOU_0050	hypothetical protein/hypothetical protein

AGATCATCAATTATTTTGTCACATTATCTTGAGAGGATTACCTTATGAGGTAGCCTTTTATTTGTCACCTAATATTGCTCTAAGGCTA  >  CP000730/58844‑58931                                         |                                                aGATCATCAATTATTTTGTCACATTATCTTGAGAGGATTACCTTATGAGGTAGCCTTTTATTTGTCACCTAATATTGCTCTAAGGCta  >  1:513514/1‑88 (MQ=255) aGATCATCAATTATTTTGTCACATTATCTTGAGAGGATTACCTTATGAGGTAGCCTTTTATTTGTCACCTAATATTGCTCTAAGGCta  <  2:513514/88‑1 (MQ=255)      atcaATTATTTTGTCACATTATCTTGAGAGGATTActta                                              >  1:479649/1‑36 (MQ=255)      atcaATTATTTTGTCACATTATCTTGAGAGGATTActta                                              >  1:479863/1‑36 (MQ=255)      atcaATTATTTTGTCACATTATCTTGAGAGGATTActta                                              <  2:479649/39‑4 (MQ=255)      atcaATTATTTTGTCACATTATCTTGAGAGGATTActta                                              <  2:479863/39‑4 (MQ=255)                                         |                                                AGATCATCAATTATTTTGTCACATTATCTTGAGAGGATTACCTTATGAGGTAGCCTTTTATTTGTCACCTAATATTGCTCTAAGGCTA  >  CP000730/58844‑58931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑