Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	58885	59035	151	6 [2]	[3] 5	USA300HOU_0049/USA300HOU_0050	hypothetical protein/hypothetical protein

TGATATTTAATAATTAAATAAAAGTATGCTAAATATTTATAATTTACAAGTGAGCTGATAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAACTGAGTTAGAAAACGAACGCACTCGCTATTTTATATTAGA  >  CP000730/58978‑59140                                                           |                                                                                                         tGATATTTAATAATTAAATAAAAGTATGCTAAATATTTATAATTTACAAGTGAGCTGATAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAACTGAGTTAGAAaacgaac                        >  2:462181/1‑141 (MQ=255)             atTAAATAAAAGTATGCTAAATATTTATAATTTACAAGTGAGCTGATAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAGCTGAGTTAGAAAACGAACGCACTCGCTAtt            >  1:399409/1‑141 (MQ=255)                       aGTATGCTAAATATTTATAATTTACAAGTGAGCTGATAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAACTGAGTTAGAAAACGAACGCACTCGCTATTTTATATTAGa  >  1:551829/1‑141 (MQ=255)                                                           tAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAACTGAGTTAGAAAACGAACGCACTCGc                <  1:415429/91‑1 (MQ=255)                                                           tAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAACTGAGTTAGAAAACGAACGCACTCGc                >  2:415429/1‑91 (MQ=255)                                                           |                                                                                                         TGATATTTAATAATTAAATAAAAGTATGCTAAATATTTATAATTTACAAGTGAGCTGATAGAAAGATGAGTATAAGCGAATATAAAAATAGATACTTAGAGTCACTATATAACACCTTTAAAACTGAGTTAGAAAACGAACGCACTCGCTATTTTATATTAGA  >  CP000730/58978‑59140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑