Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP000730 54593 54624 32 2 [0] [1] 3 USA300HOU_0044/cch possible transcriptional regulator/possible beta‑lactamase

AGAAGCTGATATATTGCGAACTAAAAAAGTAATTAAAAGTTTAGAGTCTTTCTTTAGGAATAAATAAAAAAACAAGAGATAGGTGCGAAGTGTTTGGATTATACAA  >  CP000730/54487‑54592
                                                                                                         |
agaagCTGATATATTGCGAACTAAAAAAGTAATTAAAAGTTTAGAGTCTTTCTTTAGGAATAAATAAAAAAACAAGAGATAGGTGCGAAGTGTTTGGATTATACaa  <  1:173087/106‑1 (MQ=255)
agaagCTGATATATTGCGAACTAAAAAAGTAATTAAAAGTTTAGAGTCTTTCTTTAGGAATAAATAAAAAAACAAGAGATAGGTGCGAAGTGTTTGGATTATACaa  >  2:173087/1‑106 (MQ=255)
                                                                                                         |
AGAAGCTGATATATTGCGAACTAAAAAAGTAATTAAAAGTTTAGAGTCTTTCTTTAGGAATAAATAAAAAAACAAGAGATAGGTGCGAAGTGTTTGGATTATACAA  >  CP000730/54487‑54592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: