Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	169697	169751	55	2 [0]	[1] 2	USA300HOU_0160	hypothetical protein

GATTTTTTTGAAAAGTGGTCGTTTATTTTAAATTTAATTTTATTTTGTGCTT  >  CP000730/169645‑169696                                                    | gaTTTTTTTGAAAAGTGGTCGTTTATTTTAAATTTAATTTTATTTTGTGCtt  >  1:14867/1‑52 (MQ=255) gaTTTTTTTGAAAAGTGGTCGTTTATTTTAAATTTAATTTTATTTTGTGCtt  <  2:14867/52‑1 (MQ=255)                                                    | GATTTTTTTGAAAAGTGGTCGTTTATTTTAAATTTAATTTTATTTTGTGCTT  >  CP000730/169645‑169696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑