Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	169697	169751	55	2 [0]	[1] 2	USA300HOU_0160	hypothetical protein

ATTTATATTTTTTGTACATTATTAATATCATTATTACCTTTGCTAAATATTATAAAAAGAATAGGCTGGGAAATAAATCAATCTTCTATGATCTACGAAGTTATATTGGCAGTAATTGACTGAACGAAAATGCGCTTGTAATAAGCTTTTTT  >  CP000730/169741‑169892            |                                                                                                                                             atttATATTTTTTGTACATTATTAATATCATTATTACCTTTGCTAAATATTATAAAAAGAATAGGCTGGGAAATAAATCAATCTTCTATGATCTACGAAGTTATATTGGCAGTAATTGACTGAACGAAAATGCGCTTGtaa             >  2:88508/1‑141 (MQ=255)            ttGTACATTATTAATATCATTATTACCTTTGCTAAATATTATAAAAAGAATAGGCTGGGAAATAAATCAATCTTCTATGATCTACGAAGTTATATTGGCAGTAATTGACTGAACGAAAATGCGCTTGTAATAAGCtttttt  >  1:29259/1‑141 (MQ=255)            |                                                                                                                                             ATTTATATTTTTTGTACATTATTAATATCATTATTACCTTTGCTAAATATTATAAAAAGAATAGGCTGGGAAATAAATCAATCTTCTATGATCTACGAAGTTATATTGGCAGTAATTGACTGAACGAAAATGCGCTTGTAATAAGCTTTTTT  >  CP000730/169741‑169892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑