mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2257232 = | 83 (0.800) | 4 (0.040) | 3/248 | NT | 5.0% | coding (293/414 nt) | yuxK | hypothetical protein |
| ? | CP000730 | 2257282 = | 74 (0.750) | coding (243/414 nt) | yuxK | hypothetical protein | |||||
| * | ? | CP000730 | = 1744053 | 92 (0.890) | 3 (0.030) | 3/246 | NT | 3.6% | intergenic (‑307/+100) | relA2/apt | GTP pyrophosphokinase/adenine phosphoribosyltransferase |
| ? | CP000730 | = 1744121 | 75 (0.770) | intergenic (‑375/+32) | relA2/apt | GTP pyrophosphokinase/adenine phosphoribosyltransferase | |||||
| * | ? | CP000730 | 1343877 = | 83 (0.800) | 3 (0.030) | 3/248 | NT | 3.9% | coding (14/267 nt) | USA300HOU_1252 | hypothetical protein |
| ? | CP000730 | 1343895 = | 69 (0.700) | coding (32/267 nt) | USA300HOU_1252 | hypothetical protein | |||||
| * | ? | CP000730 | 1131177 = | 111 (1.080) | 4 (0.040) | 3/242 | NT | 3.7% | intergenic (+141/‑1087) | ylbF/USA300HOU_1059 | hypothetical protein/hypothetical protein |
| ? | CP000730 | 1131203 = | 103 (1.070) | intergenic (+167/‑1061) | ylbF/USA300HOU_1059 | hypothetical protein/hypothetical protein | |||||
| * | ? | CP000730 | 864131 = | 93 (0.900) | 4 (0.040) | 3/254 | NT | 4.1% | coding (321/459 nt) | USA300HOU_0807 | hypothetical membrane protein |
| ? | CP000730 | 864198 = | 94 (0.930) | coding (388/459 nt) | USA300HOU_0807 | hypothetical membrane protein | |||||
| * | ? | CP000730 | = 810093 | 122 (1.180) | 3 (0.030) | 3/246 | NT | 2.6% | intergenic (+24/‑94) | nrdE/nrdF | ribonuceloside diphosphate reductase subunit alpha/ribonucleoside‑diphosphate reductase subunit beta |
| ? | CP000730 | = 810144 | 107 (1.100) | intergenic (+75/‑43) | nrdE/nrdF | ribonuceloside diphosphate reductase subunit alpha/ribonucleoside‑diphosphate reductase subunit beta | |||||
| * | ? | CP000730 | = 782423 | 79 (0.770) | 3 (0.030) | 3/240 | NT | 3.8% | intergenic (‑218/+124) | USA300HOU_0730/USA300HOU_0731 | hypothetical membrane protein/hypothetical lipoprotein |
| ? | CP000730 | = 782442 | 79 (0.830) | intergenic (‑237/+105) | USA300HOU_0730/USA300HOU_0731 | hypothetical membrane protein/hypothetical lipoprotein | |||||