New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2561201 =55 (1.050)3 (0.060) 3/232 NT 5.9% intergenic (+30/+33) USA300HOU_2422/USA300HOU_2423 hypothetical protein/hypothetical protein
?CP000730 2561237 = 47 (1.000)coding (804/807 nt) USA300HOU_2423 hypothetical protein

ATTCGTAAAGAGAAAATGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATAACATCTGCCATC  >  CP000730/2561061‑2561338
                                                                                                                                            |                                                                                                                                         
ttatgggccatgttcattttcgtaaaagtgtgatagatgatggcagatgttatctctgtccgtgtctaggctatccaagacaatggcgttcagaagatatttaccaggaaataaatgagacgatacaaataatagaaattt                                                                                                                                           <  1:402518‑M1/1‑1 (MQ=255)
 tatgggccatgttcattttcgtaaaagtgtgatagatgatggcagatgttatctctgtccgtgtctaggctatccaagacaatggcgttcagaagatatttaccaggaaataaatgagacgatacaaataatagaaattTa                                                                                                                                          <  2:292805‑M1/2‑1 (MQ=255)
   tgggccatgttcattttcgtaaaagtgtgatagatgatggcagatgttatctctgtccgtgtctaggctatccaagacaatggcgttcagaagatatttaccaggaaataaatgagacgatacaaataatagaaattTaaa                                                                                                                                        <  2:213918‑M1/4‑1 (MQ=255)
   cGTAAAGAGAAAATGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATaaa                                                                                                                                        >  1:345894/1‑141 (MQ=255)
    gggccaggttcattttcgtaaaagtgtgatagatgatggcagatgttatctctgtccgtgtctaggctatccaagacaatggcgttcagaagatatttaccaggaaataaatgagacgatacaaataatagaaattTaaaa                                                                                                                                       >  1:464136‑M1/137‑141 (MQ=255)
    gTATAGAGAAAATGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGGGTGTAAAACATaaaa                                                                                                                                       >  2:103454/1‑141 (MQ=255)
       aaGAGAAAATGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATgc                                                                                                                                    >  1:285599/1‑141 (MQ=255)
           aaaaaTGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCaa                                                                                                                                <  1:125532/140‑1 (MQ=255)
                  gAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAAcctgac                                                                                                                         <  2:67749/141‑6 (MQ=255)
                   aaTACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGta                                                                                                                        >  2:157311/1‑140 (MQ=255)
                    aTACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCa                                                                                                                       <  1:566512/141‑1 (MQ=255)
                         gCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGttt                                                                                                                  >  2:275409/1‑141 (MQ=255)
                           tttAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTgc                                                                                                                <  2:75133/141‑1 (MQ=255)
                               aTTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAGCTGGGTGAGGTTTGCGCAt                                                                                                            >  1:2839/1‑141 (MQ=255)
                                   aCCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTa                                                                                                        >  2:50852/1‑141 (MQ=255)
                                   aCCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTa                                                                                                        >  2:402924/1‑141 (MQ=255)
                                      aGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTaaaa                                                                                                     >  2:501809/1‑140 (MQ=255)
                                      aGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAAAAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAAt                                                                                                     >  1:534276/1‑141 (MQ=255)
                                         aagaaAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTc                                                                                                  <  2:417058/141‑1 (MQ=255)
                                          agaaAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCt                                                                                                 <  1:562301/141‑1 (MQ=255)
                                                tGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTattatt                                                                                           >  1:85177/1‑141 (MQ=255)
                                                 gCATTTATGTGCAATCACATTCCTATACAATTGAAAATCAGCAACAAAATAAACACACGTGAGTAAACACATGACTCGCGTGTGTAAATCATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTAttt                                                                                          <  1:108618/141‑1 (MQ=255)
                                                     ttATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTAt                                                                                      <  1:347325/141‑1 (MQ=255)
                                                        tgtgCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGt                                                                                   >  2:325513/1‑141 (MQ=255)
                                                         gtgCCACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAACATCCGCAAACTGGGTCAGGTATGCGCATTTTAAACTTCTATTATTTGTATCGtt                                                                                  >  1:416094/1‑140 (MQ=255)
                                                           gCAACCATATTCATATACGAGTGAGAAGCAGCAACAAAAGAAACACAGGTACGTAAACACATTCCTCGCGTGTGGAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGtctc                                                                                <  2:173249/141‑1 (MQ=255)
                                                              aCCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTGAACGCTTTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCatt                                                                             <  1:473330/141‑1 (MQ=255)
                                                              aCCACATTCATATACAATTCAAAATCAGCAACAAAATAAACACCCGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCatt                                                                             <  1:544441/141‑1 (MQ=255)
                                                               ccACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCattt                                                                            >  2:402518/1‑141 (MQ=255)
                                                               ccACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGCCAGGTTTGCGCATTTTAAATTTCTAATATTTGTATCGTCTCattt                                                                            >  2:255961/1‑141 (MQ=255)
                                                                   aTTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTAAGGTTTGCGCGTTTTAAATTTCTATTATTTGTATCGTCTCatttattt                                                                        >  1:113200/1‑141 (MQ=255)
                                                                     tCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTcc                                                                      >  1:289534/1‑141 (MQ=255)
                                                                      gaaataCAATTAAAAATCAGCAACCAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGAATTGCGCAATATCAATAGATATTGTTTGGATCGTCTCATTTATTTCCt                                                                     >  2:428320/4‑141 (MQ=255)
                                                                      cATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCACATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCt                                                                     <  2:295765/141‑1 (MQ=255)
                                                                       atatACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAAAACATTACTAGCGTGTGTAAAACATAACATGCGCAAACTGGGTCAGGTTGGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTg                                                                    <  1:478944/141‑1 (MQ=255)
                                                                                gtaaaaTCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGCAAAACAGAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATAtc                                                           <  1:511517/139‑1 (MQ=255)
                                                                                 gAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACCCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATAtct                                                          <  1:79959/141‑1 (MQ=255)
                                                                                    ggcgttcagaagatatttaccaggaaataaatgagacgatacaaataatagaaattTAAAATGCGCAAACCTGACCCCGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATAtcttct                                                       <  1:412352‑M1/85‑1 (MQ=255)
                                                                                    aaTCAGAAACAAAATAAACACACGTAAGTAAGCACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTTCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATAtcttct                                                       <  2:79216/141‑1 (MQ=255)
                                                                                     aTCAGCAACAAAATAAACACACATAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTg                                                      <  2:147181/141‑1 (MQ=255)
                                                                                     aTCAGAAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTg                                                      <  2:326596/141‑1 (MQ=255)
                                                                                      tCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCGAACTGGGTCAGGTCGGCGCATGTAAAAGTGCGAGTATTTGGATCGTCTCATTTATTTCCTGGTAGATATGTTCTGa                                                     >  2:217350/1‑141 (MQ=255)
                                                                                      tCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGa                                                     >  1:476230/1‑141 (MQ=255)
                                                                                          cagaagatatttaccaggaaataaatgagacgatacaaataatagaaattTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGTTAAATATCTTCTGAACGc                                                 <  2:295123‑M1/91‑1 (MQ=255)
                                                                                           agaagatatttaccaggaaataaatgagacgatacaaataatagaaattTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGcc                                                >  2:412352‑M1/50‑141 (MQ=255)
                                                                                           aacaaAATAAACACACGTAAGTAAACACATTACACGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGACCGcc                                                <  1:415367/141‑1 (MQ=255)
                                                                                               aaaTAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTg                                            >  2:350263/1‑141 (MQ=255)
                                                                                               aaaTAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTg                                            >  2:73494/1‑141 (MQ=255)
                                                                                                aaTAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGt                                           >  2:372975/1‑141 (MQ=255)
                                                                                                 aTAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTCAATATCTTCTGAACGCCCTTGTc                                          >  2:79448/1‑141 (MQ=255)
                                                                                                     acacacGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTgg                                      >  2:38917/1‑141 (MQ=255)
                                                                                                      cacacGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTCTTCTTTGTAGCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTTTCTTGGa                                     <  2:431206/141‑1 (MQ=255)
                                                                                                      cacacGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGa                                     >  1:65134/1‑141 (MQ=255)
                                                                                                        cacGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATa                                   >  2:98901/1‑141 (MQ=255)
                                                                                                         acGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAg                                  >  1:555689/1‑141 (MQ=255)
                                                                                                            taaccaaaaccaTCACTCGAATGAGTACAACATAAAAAGCGCAAAATGGGTCAGGTTTGCGCAATTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCt                               <  1:276942/131‑1 (MQ=255)
                                                                                                                taaACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGac                           >  1:328222/1‑141 (MQ=255)
                                                                                                                  atcacaTGACTCGCGTGTGTAAAACCTAAAATTCGCAAACTGGGTCAGGTTTGCGCTTTTTAAATTCCTATCATTTTTAGCGTCCCATTTATTTCCTGGTACATATCTTCTGAACGCCATTGTCTGGGATAGCCTATaccc                         <  2:2839/139‑3 (MQ=255)
                                                                                                                        ttACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACag                   >  2:320746/1‑141 (MQ=255)
                                                                                                                        ttACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACag                   >  1:499616/1‑141 (MQ=255)
                                                                                                                              gcgTGTGTAAAACATAAAATGCGCTAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATaa             >  1:390810/1‑141 (MQ=255)
                                                                                                                                 tgtgtAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCCAGACACGGACAGAGATAACAt          <  1:325513/141‑1 (MQ=255)
                                                                                                                                   tgtAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATAACATCt        <  2:432016/141‑1 (MQ=255)
                                                                                                                                   tgtAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATAACATCt        >  2:446594/1‑141 (MQ=255)
                                                                                                                                       aaaCATAAAATGCGCAAACTGGATCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATAACATCTGCca    >  2:446360/1‑141 (MQ=255)
                                                                                                                                         aCATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATAACATCTGCcatc  <  1:275409/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                         
ATTCGTAAAGAGAAAATGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATTTATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAAGTAAACACATTACTCGCGTGTGTAAAACATAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATAACATCTGCCATC  >  CP000730/2561061‑2561338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.