| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1409145 = | 109 (1.580) | 3 (0.050) | 3/278 | 2.2 | 2.9% | coding (410/1215 nt) | trpB | tryptophan synthase beta subunit |
| ? | CP000730 | 1409186 = | 103 (1.610) | coding (451/1215 nt) | trpB | tryptophan synthase beta subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCATCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1409305‑1409145‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagacaacaaCTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCATTAGGT > CP000730/1409186‑1409335 ATCATCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATA < 1:166704/151‑1ATCATCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTGAATATCTTCACTTCCCATA < 1:933627/151‑1 ATCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAG < 1:698051/151‑1 ATCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAAATCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAG > 2:592566/1‑151 TCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACAGAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGA > 1:818945/1‑151 CTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGAC < 1:780672/151‑1 ACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAA > 2:85419/1‑151 ACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAA < 1:207512/151‑1 ATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAGCCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAACA < 1:86175/151‑1 ATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAACA < 2:261458/151‑1 TGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATACCTTCACTTCCCATAAAGACAACAA > 2:1042003/1‑151 CATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGG > 1:481125/1‑151 TTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTA > 1:707434/1‑151 GTCTTTTAATATCTTCACTTCCCATAAAGACAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAAAATTGGGTAAGTCATGTAG > 1:286527/1‑151 AAAGACAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTC < 2:979869/151‑1 AAGACAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCT > 2:491900/1‑151 GACAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTATGC > 2:1045521/1‑151 CAACAACTTAATGTATTTATAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCAT > 1:932224/1‑151 CAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCAT > 2:286590/1‑151 CAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCAT > 1:396621/1‑151 CAACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCAT > 1:633784/1‑151 ACAACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCATTA > 1:450725/1‑151 AACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCATTAGG < 2:706104/151‑1 ACTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCATTAGGT < 1:792708/151‑1 ATCATCTACATGACTTACCCAATATTGCAATGCTTTATTAACTGCATCCGATAAAGTCCCTTGACCATCTTCAACTGCCACAACCTTTGCACCAAGTAATTCCATTCTAAATACATTAAGTTGTTGTCTTTTAATATCTTCACTTCCCATAAAGACAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1409305‑1409145‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagacaacaaCTTAATGTATTTAGAATGGAATTACTTGGTGCAAAGGTTGTGGCAGTTGAAGATGGTCAAGGGACTTTATCGGATGCAGTTAATAAAGCATTGCAATATTGGGTAAGTCATGTAGATGATACACATTATTTATTAGGTTCTGCATTAGGT > CP000730/1409186‑1409335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |