New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2687481	83 (1.200)	5 (0.080)	5/278	1.9	6.0%	intergenic (+35/+34)	clp/USA300HOU_2543	S14 family endopeptidase Clp/hypothetical protein
	?	CP000730	= 2687499	81 (1.270)					intergenic (+53/+16)	clp/USA300HOU_2543	S14 family endopeptidase Clp/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

CGTGACAAAATTACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGCATATCCGA  >  CP000730/2687351‑2687645                                                                                                                                                     |                                                                                                                                                    cGTGACAAAATTACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGtg                                                                                                                                                   <  2:857387‑M2/151‑3 (MQ=255) cGTGACAAAATTACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGtg                                                                                                                                                   <  2:167923‑M2/151‑3 (MQ=255)       aaaaTTACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGtgctcatt                                                                                                                                             >  2:116468‑M2/1‑143 (MQ=255)            tACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑ttttttt                                                                                                                                       <  1:745750/151‑1 (MQ=255)              cAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTGGCGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTaa                                                                                                                                     <  1:602306/151‑1 (MQ=255)                naTTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAatt                                                                                                                                   >  2:975418/2‑151 (MQ=255)                gATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAatt                                                                                                                                   >  2:538186/1‑151 (MQ=255)                  ttgcTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAattat                                                                                                                                 >  2:772642/4‑151 (MQ=255)                       aTTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTccc                                                                                                                            >  2:275045/1‑151 (MQ=255)                       aTTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTAGGTccc                                                                                                                            >  1:756561/1‑151 (MQ=255)                         ttAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTg                                                                                                                          <  2:399181/151‑1 (MQ=255)                          tAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTgg                                                                                                                         >  1:863032/1‑151 (MQ=255)                             aTCATACAGACGTTAAACATGTGGATATAGATGTTGAGAATAACGAATCAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGaaa                                                                                                                      <  1:10974/151‑1 (MQ=255)                                aTACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATg                                                                                                                   <  2:178077/151‑1 (MQ=255)                                  aCAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACGCTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGAt                                                                                                                 <  2:121007/151‑1 (MQ=255)                                   cAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGAtt                                                                                                                <  1:931764/151‑1 (MQ=255)                                   cAGACGTTAAACAAGTGGCTATAGGAGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGAtt                                                                                                                <  2:313015/151‑1 (MQ=255)                                    aGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTc                                                                                                               <  1:922982/151‑1 (MQ=255)                                        gTTAAACATGTTGAGATAGATTGTGATGATAACGAATGAGTCGTAAAGGGTAAATAACGACACGATAACATATCGCGCATCAAAAATGAGCATCAGGTCACCGTTGCCTGTGCTCA‑TTTTTTTAATTAATAAACAAAAAAATGATTCGCtg                                                                                                           <  2:900420/151‑1 (MQ=255)                                        gTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCtg                                                                                                           >  1:555477/1‑151 (MQ=255)                                          tAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCtgtg                                                                                                         <  1:198781/151‑1 (MQ=255)                                            aaCATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCtgtgtg                                                                                                       >  2:518935/1‑151 (MQ=255)                                            aaCATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCtgtgtg                                                                                                       <  2:36878/151‑1 (MQ=255)                                            aaCATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCtgtgtg                                                                                                       <  1:631078/151‑1 (MQ=255)                                              cATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGct                                                                                                     >  1:43346/1‑151 (MQ=255)                                               aTGTTGATATAGAGGTGGTGTTTAGCGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAATATTAGCATCAGGTCGCCCTTGCCTTGGCTCA‑TTTTGTTGATTATTTCCCTGGAAAATGATTCGCTGTGTGcgg                                                                                                    <  2:423611/151‑3 (MQ=255)                                                tgtgGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgt                                                                                                   >  1:928760/1‑151 (MQ=255)                                                 gtgGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgtt                                                                                                  >  1:558112/1‑151 (MQ=255)                                                  tgGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgttc                                                                                                 <  1:400517/151‑1 (MQ=255)                                                  tgGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgttc                                                                                                 <  2:462781/151‑1 (MQ=255)                                                     atatAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgttctgg                                                                                              <  2:854799/151‑2 (MQ=255)                                                      tataGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgttctgtt                                                                                             >  1:168605/1‑151 (MQ=255)                                                      tataGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGctgttctgtt                                                                                             >  1:168667/1‑151 (MQ=255)                                                        taGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTcc                                                                                           >  2:508388/1‑151 (MQ=255)                                                         aGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCTCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCca                                                                                          <  2:1057356/151‑1 (MQ=255)                                                         aGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCca                                                                                          <  1:861836/151‑1 (MQ=255)                                                         aGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCca                                                                                          <  2:222650/151‑1 (MQ=255)                                                             gTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCacaac                                                                                      >  1:407302/1‑151 (MQ=255)                                                             gTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCacaac                                                                                      >  2:521106/1‑151 (MQ=255)                                                                  ggATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCa                                                                                 <  2:388233/151‑1 (MQ=255)                                                                    aTAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACg                                                                               >  2:810951/1‑151 (MQ=255)                                                                       aCGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGAtt                                                                            <  2:398686/151‑1 (MQ=255)                                                                        gggaTTAGTCGTAAAAGGTAAATAACGGCACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTa                                                                           <  2:439006/148‑1 (MQ=255)                                                                               gTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTcac                                                                    <  1:495961/151‑1 (MQ=255)                                                                                 cGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACAt                                                                  >  2:465907/1‑151 (MQ=255)                                                                                     aaaGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTAc                                                              <  1:413930/151‑1 (MQ=255)                                                                                        ggTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACcac                                                           <  2:98554/151‑1 (MQ=255)                                                                                        ggTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACcac                                                           >  2:1033084/1‑151 (MQ=255)                                                                                        ggTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACcac                                                           >  2:882348/1‑151 (MQ=255)                                                                                         gTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACcaca                                                          >  2:349577/1‑151 (MQ=255)                                                                                                aCGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCt                                                   <  2:328827/151‑1 (MQ=255)                                                                                                aCGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCt                                                   >  2:757428/1‑151 (MQ=255)                                                                                                aCGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCt                                                   >  1:608382/1‑151 (MQ=255)                                                                                                aCGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCt                                                   >  2:553585/1‑151 (MQ=255)                                                                                                aCGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCt                                                   >  1:786583/1‑151 (MQ=255)                                                                                                      cTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGtttt                                             <  1:757356/151‑1 (MQ=255)                                                                                                       tttAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTg                                            <  2:863032/151‑1 (MQ=255)                                                                                                          aaCATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAAc                                         <  2:618304/151‑1 (MQ=255)                                                                                                          aaCATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAAc                                         <  2:630560/151‑1 (MQ=255)                                                                                                           aCATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACg                                        <  1:811752/151‑1 (MQ=255)                                                                                                            cATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGc                                       >  1:433443/1‑151 (MQ=255)                                                                                                             atatCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCt                                      <  2:168605/151‑1 (MQ=255)                                                                                                             atatCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCt                                      <  2:168667/151‑1 (MQ=255)                                                                                                              tatCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCtt                                     <  2:468152/151‑1 (MQ=255)                                                                                                                 cgcgCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGaa                                  <  1:926219/151‑1 (MQ=255)                                                                                                                  gcgcATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGaaa                                 <  1:882348/151‑1 (MQ=255)                                                                                                                     cATCAAAAATGAGCATCAGGTCGCCCTTGCCTGtgctcatttttgatgcgcgatatgttaaagtgtcgttatttaccttttacgactaattcgttatcctcaacatctatatccacatgtttaacgtctgtatgatctaaatagtaatctg                               <  2:538228‑M2/151‑119 (MQ=255)                                                                                                                      aTCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAAtt                             >  2:754085/1‑151 (MQ=255)                                                                                                                       tCAAAAATGAGCATCAGGTCGCCCTTGCCTGtgctcatttttgatgcgcgatatgttaaagtgtcgttatttaccttttacgactaattcgttatcctcaacatctatatccacatgtttaacgtctgtatgatctaaatagtaatctgta                             <  2:191715‑M2/151‑121 (MQ=255)                                                                                                                       tCAAAAANGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGCACGCTTGAAAAAttt                            <  2:798040/151‑1 (MQ=255)                                                                                                                         aaaaaTGAGCATCAGGTCGCCCTTGCCTGtgctcatttttgatgcgcgatatgttaaagtgtcgttatttaccttttacgactaattcgttatcctcaacatctatatccacatgtttaacgtctgtatgatctaaatagtaatctgtaat                           <  2:811770‑M2/151‑123 (MQ=255)                                                                                                                         aaaaaTGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTa                          <  1:697375/151‑1 (MQ=255)                                                                                                                          aaaaTGAGCATCAGGTCGCCCTTGCCTGtgctcatttttgatgcgcgatatgttaaagtgtcgttatttaccttttacgactaattcgttatcctcaacatctatatccacatgtttaacgtctgtatgatctagatagtaatctgtaatt                          <  1:331403‑M2/151‑124 (MQ=255)                                                                                                                          aaaaTGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTAc                         >  1:86235/1‑151 (MQ=255)                                                                                                                            aaTGAGCATCAGGTCGCCCTTGCCTGtgctcatttttttttcgcgatatgttaaagtgtcgttatttaccttttacgactaattcgttatcctcaacatctatatccacatgtttaacgtctgtatgatctaaatagtaatctgtaatttt                        <  2:479348‑M2/151‑126 (MQ=255)                                                                                                                            aaTGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTa                       >  2:884052/1‑151 (MQ=255)                                                                                                                              tGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAgt                     <  1:894358/151‑1 (MQ=255)                                                                                                                               gAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAgtg                    <  1:734149/151‑1 (MQ=255)                                                                                                                                aGCATCAGGTCGCCCTTGCCTGTGCTCATTTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAgtg                    <  2:1044904/151‑1 (MQ=255)                                                                                                                                  cATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGtat                 <  2:326551/151‑1 (MQ=255)                                                                                                                                       ggTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAg            >  1:972828/1‑151 (MQ=255)                                                                                                                                       ggTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAg            <  1:804359/151‑1 (MQ=255)                                                                                                                                         tCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGc          <  1:465907/151‑1 (MQ=255)                                                                                                                                         tCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGc          <  2:261350/151‑1 (MQ=255)                                                                                                                                         tCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGc          >  1:825610/1‑151 (MQ=255)                                                                                                                                          cGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGCa         <  2:250513/151‑1 (MQ=255)                                                                                                                                          cGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGCa         <  1:772642/151‑1 (MQ=255)                                                                                                                                            cccTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGCata       >  2:467044/1‑151 (MQ=255)                                                                                                                                                 gCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGCATATCCGa  >  1:754209/1‑151 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGTGACAAAATTACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAGGATAACGAATTAGTCGTAAAAGGTAAATAACGACACTTTAACATATCGCGCATCAAAAATGAGCATCAGGTCGCCCTTGCCTGTGCTCA‑TTTTTTTAATTATTTCCCTGGAAAATGATTCGCTGTGTGCTGTTCTGTTCCACAACAATCACGATTAATGTCACATGTACCACATTTTCCTTGTTTTGAACGCTTGAAAAATTTTACTAGTGTATATAAGGCATATCCGA  >  CP000730/2687351‑2687645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.