Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1604582	1604654	73	2 [1]	[1] 2	USA300HOU_1489/USA300HOU_1490	hypothetical bacteriophage protein/integrase

TCAATAATACAGGAGTATTGATAACCTTGTTTTTTTCACTAACTAAACCTATCATTGTTAGATATTTATATGGTATGTAACCTAAAACTCCTGTAAGAAGAAGCGCCCCTAGAAATTGAGTCATCTTATCACCTACTTTTTATTTTATTATAACACATTTAGTACCTAGTACTAAATTACGGGTAGCCCGACTACCCTT  >  CP000730/1604431‑1604629                                                                                                                                                       |                                                 tCAATAATACAGGAGTATTGATAACCTTGTTTTTTTCACTAACTAAACCTATCATTGTTAGATATTTATATGGTATGTAACCTAAAACTCCTGTAAGAAGAAGCGCCCCTAGAAATTGAGTCATCTTATCACCTACTTTTTATTTtattat                                                  <  2:416964/151‑1 (MQ=255)                                                 cTATCATTGTTAGATATTTATATGGTATGTAACCTAAAACTCCTGTAAGAAGAAGCGCCCCTAGAAATTGAGTCATCTTATCACCTACTTTTTATTTTATTATAACACATTTAGTACCTAGTACTAAATTACGGGTAgtcgggctacccgt  <  2:283404/151‑14 (MQ=255)                                                                                                                                                       |                                                 TCAATAATACAGGAGTATTGATAACCTTGTTTTTTTCACTAACTAAACCTATCATTGTTAGATATTTATATGGTATGTAACCTAAAACTCCTGTAAGAAGAAGCGCCCCTAGAAATTGAGTCATCTTATCACCTACTTTTTATTTTATTATAACACATTTAGTACCTAGTACTAAATTACGGGTAGCCCGACTACCCTT  >  CP000730/1604431‑1604629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑