Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1604582	1604654	73	2 [1]	[1] 2	USA300HOU_1489/USA300HOU_1490	hypothetical bacteriophage protein/integrase

ACATACGTTCTTGCAGGAGGTATAAACATGTGGATTGAAAAATTTAAAAACAAAAATAACGAAACTAAATACAGATACTACGAGAAGTATAAAGATCCATACACAGATAAATGGAAGCGCGTAAGTGTTGTGTTGAACAAGAATACAAAACAA  >  CP000730/1604653‑1604805   |                                                                                                                                                       aCATACGTTCTTGCAGGAGGTATAAACATGTGGATTGAAAAAATTAAAAACAAAAATAACGAAACTAAATACAGATACTACGAGAAGTATAAAGATCCATACACAGATAAATGGAAGCGCGTAAGTGTTGTGTTGAACAAGAATACAAAAc    >  1:449439/1‑151 (MQ=255)   aTACGTTCTTGCAGGAGGTATAAACATGTGGATTGAAAAATTTAAAAACAAAAATAACGAAACTAAATACAGATACTACGAGAAGTATAAAGATCCATACACAGATAAATGGAAGCGCGTAAGTGTTGTGTTGAACAAGAATACAAAACaa  >  1:449294/1‑151 (MQ=255)   |                                                                                                                                                       ACATACGTTCTTGCAGGAGGTATAAACATGTGGATTGAAAAATTTAAAAACAAAAATAACGAAACTAAATACAGATACTACGAGAAGTATAAAGATCCATACACAGATAAATGGAAGCGCGTAAGTGTTGTGTTGAACAAGAATACAAAACAA  >  CP000730/1604653‑1604805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑