| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2464733 | 70 (1.190) | 3 (0.060) | 3/258 | 6.9 | 4.5% | intergenic (+29/+19) | gltS/fni | ESS family glutamate:sodium (Na+) symporter/isopentenyl‑diphosphate delta‑isomerase |
| ? | CP000730 | = 2464737 | 66 (1.280) | intergenic (+33/+15) | gltS/fni | ESS family glutamate:sodium (Na+) symporter/isopentenyl‑diphosphate delta‑isomerase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATTTAGATGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAAGAGGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2464573‑2464733‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaataaaagaggaggcGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGTACAACTAAATATGCTTTAGGTGAGTTTCCATATTTT < CP000730/2464737‑2464593 AATTTAGATGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAA > 2:353469/1‑148 AGATGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAA > 1:290597/1‑148 AGATGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAA > 1:290622/1‑148 GATGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAAG < 2:95447/148‑1 TGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAACAGAG > 2:577146/1‑148 AAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAAGAGGAGGCGAAGGCCTCCTCTTTT < 1:353469/148‑1 TAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAAGAGGAGGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAAT < 1:198409/148‑1 TAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAAGAGGAGGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAAC < 1:183808/148‑1 caacgacgATAAACAAAAGAGGATGCGAAGGCCCCCTCTTATACTTATGAGTTTAGTGTTTAACTAAACCATTGTATTAATCCCATAATCACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGTACAACTAAATATG < 2:211370/140‑1 tctaggagAAATAAAAGAGGAGGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGTACAACTAAATATGCT < 1:263092/140‑1 AAAGAGGAGGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATCAGTACAACTAAATATGCTTTAGGTGAATTTC > 2:294450/1‑148 AGGAGGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGCACAACTAAATATGCTTTAGGTGAGTTTCCATA < 1:404972/148‑1 GGAGGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGTACAACTAAATATGCTTTAGGGGAGTTGCCATgt > 1:76875/1‑146 GGCGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGTACAACTAAATATGCTTTAGGTGAGTTTCCATATTTT < 2:458674/148‑1 AATTTAGATGTTATTACTAAAAAATATGGAAACTCACCTAAAGCATATTTAGTTGTACCTATTGTTGGTGCATTCTTAATCGATTTAATTGGTGTTATAGTCATTATGGGATTCATACAATGGTTTAGTTAAACACCAAACTCATAAATAAAAGAGGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2464573‑2464733‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaataaaagaggaggcGAAGGCCTCCTCTTTTATTTATGAGTTTGGTGTTTAACTAAACCATTGTATGAATCCCATAATGACTATAACACCAATTAAATCGATTAAGAATGCACCAACAATAGGTACAACTAAATATGCTTTAGGTGAGTTTCCATATTTT < CP000730/2464737‑2464593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |