New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1380507 =	75 (0.850)	4 (0.080) +GGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGT	3/160	10.2	7.6%	intergenic (+2604/‑571)	sbcC/acnA	exodeoxyribonuclease SbcC/aconitate hydratase
	?	CP000730	= 2031785	95 (1.080)					coding (51/291 nt)	USA300HOU_1886	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAATAGAAAGGGGTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGAAAAGTCA  >  CP000730/1380369‑1380644                                                                                                                                           |                                                                                                                                          ttAATAGAAAGGGGTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGa                                                                                                                                         <  2:802202/141‑1 (MQ=255)   aaTAGAAAGGGGTTTGACAAAGCTAAAGTGAAGTTTGACTGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACt                                                                                                                                       <  1:727666/141‑1 (MQ=255)   aaTAGAAAGGGGTTTGACAAAGCTAAAGTGAAGTTTGACCGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACt                                                                                                                                       <  1:727874/141‑1 (MQ=255)        aaaGGGGTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACg                                                                                                                                  <  2:220667/141‑1 (MQ=255)         aaGGGGTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGa                                                                                                                                 >  1:905910/1‑141 (MQ=255)          aGGGGTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaa                                                                                                                                >  2:512842/1‑141 (MQ=255)           ggggTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaa                                                                                                                               >  2:404258/1‑141 (MQ=255)              gTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATg                                                                                                                            <  2:546070/141‑1 (MQ=255)                  gACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCt                                                                                                                        <  2:224457/141‑1 (MQ=255)                       aGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTaa                                                                                                                   >  2:806687/1‑141 (MQ=255)                         cTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACa                                                                                                                 <  1:433717/141‑1 (MQ=255)                           aaaGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAg                                                                                                               >  2:52142/1‑141 (MQ=255)                            aaGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGc                                                                                                              <  1:164653/141‑1 (MQ=255)                              gTGAAGTTTGACGGTATAAACGCAACTTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCtt                                                                                                            >  2:844353/1‑141 (MQ=255)                              gTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCtt                                                                                                            <  2:9857/141‑1 (MQ=255)                              gTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCtt                                                                                                            >  2:163764/1‑141 (MQ=255)                                 aaGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttttt                                                                                                         <  1:849464/141‑1 (MQ=255)                                  aGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCtttttt                                                                                                        <  2:450839/141‑1 (MQ=255)                                   gTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTc                                                                                                       >  1:121998/1‑141 (MQ=255)                                    tttGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCa                                                                                                      >  2:939800/1‑141 (MQ=255)                                    tttGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCa                                                                                                      <  2:693171/141‑1 (MQ=255)                                      tGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAAt                                                                                                    <  1:363925/141‑1 (MQ=255)                                       gACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAAtt                                                                                                   >  2:824867/1‑141 (MQ=255)                                          ggTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTa                                                                                                <  2:203945/141‑1 (MQ=255)                                           gTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAg                                                                                               <  1:312259/141‑1 (MQ=255)                                             ataAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTc                                                                                             >  1:900046/1‑141 (MQ=255)                                               aaaCGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAg                                                                                           >  1:307835/1‑141 (MQ=255)                                                aaCGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAgg                                                                                          >  2:38115/1‑141 (MQ=255)                                                     aaaTTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGccc                                                                                     <  1:333180/141‑1 (MQ=255)                                                     aaaTTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGccc                                                                                     <  1:241226/141‑1 (MQ=255)                                                        ttAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCaa                                                                                  >  1:489238/1‑141 (MQ=255)                                                         tAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAac                                                                                 >  1:767444/1‑141 (MQ=255)                                                          aaaTATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAaca                                                                                <  2:913229/141‑1 (MQ=255)                                                          aaaTATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTAAGGGGCCCCAaca                                                                                >  1:777820/1‑141 (MQ=255)                                                           aaTATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAacac                                                                               <  1:68870/141‑1 (MQ=255)                                                            atatACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAAcaca                                                                              <  1:182606/141‑1 (MQ=255)                                                            atatACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAAcaca                                                                              >  2:199246/1‑141 (MQ=255)                                                               taCTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACagag                                                                           <  2:179367/141‑1 (MQ=255)                                                                aCTTTTATAGAATATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGAGCTTGTAACAAGCTTTTTTCAATTCTAGTCGGGGCCTCCATCACAgaga                                                                          <  2:623351/141‑1 (MQ=14)                                                                  ttttATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAAt                                                                        >  1:655536/1‑141 (MQ=255)                                                                           aaaTTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAg                                                               >  1:55466/1‑141 (MQ=40)                                                                           aaaTTAACTCAGGCTGGGACATAAATCAATATCCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAg                                                               <  1:104183/141‑1 (MQ=255)                                                                            aaTTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGa                                                              <  2:65830/141‑1 (MQ=39)                                                                             aTTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaa                                                             <  2:394196/141‑1 (MQ=38)                                                                              ttAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaaa                                                            <  2:126106/141‑1 (MQ=38)                                                                              ttAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGaaa                                                            <  1:984904/141‑1 (MQ=38)                                                                                 aCTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTc                                                         <  1:922182/141‑1 (MQ=34)                                                                                  cTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCt                                                        >  1:261427/1‑141 (MQ=34)                                                                                    cAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTAc                                                      <  1:855492/141‑1 (MQ=32)                                                                                      ggCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAg                                                    <  1:116767/141‑1 (MQ=32)                                                                                         tGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCa                                                 <  1:929192/141‑1 (MQ=32)                                                                                          gggACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCaa                                                <  1:817567/141‑1 (MQ=32)                                                                                          gggACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCaa                                                <  1:594917/141‑1 (MQ=32)                                                                                            gACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATg                                              <  2:655536/141‑1 (MQ=32)                                                                                              cATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCg                                            <  1:871481/141‑1 (MQ=33)                                                                                                tAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAg                                          <  1:527299/141‑1 (MQ=35)                                                                                                 aaaTCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGt                                         <  2:419032/141‑1 (MQ=34)                                                                                                           tCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAgg                               >  2:730660/1‑141 (MQ=35)                                                                                                           tCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGGCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAgg                               <  1:823622/141‑1 (MQ=21)                                                                                                             tATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGc                             <  2:222955/141‑1 (MQ=35)                                                                                                             tATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGc                             >  1:395050/1‑141 (MQ=35)                                                                                                               tGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGccc                           <  2:237675/141‑1 (MQ=38)                                                                                                                     aCGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAacac                     <  1:738549/141‑1 (MQ=39)                                                                                                                         aGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACGCAGaa                 >  1:823661/1‑141 (MQ=37)                                                                                                                          gTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAg                <  2:445718/141‑1 (MQ=35)                                                                                                                           ttATATTGGCAGTTGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGc               <  2:148600/141‑1 (MQ=25)                                                                                                                               atTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGAc           >  2:108237/1‑141 (MQ=38)                                                                                                                               atTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGAc           <  2:609795/141‑1 (MQ=38)                                                                                                                                 tGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGCCCGGGGCCACAAAAGCGAGAACTTCGAACAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGActt         <  1:586786/141‑3 (MQ=14)                                                                                                                                 tGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCGAGTCAGGGGCCCCAACACAGAGGATTTCGAAAGGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGa         <  1:975743/141‑1 (MQ=255)                                                                                                                                  ggCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGATATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGaa        <  1:512842/141‑1 (MQ=255)                                                                                                                                  ggCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGaa        <  1:969586/141‑1 (MQ=38)                                                                                                                                   gCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGActttt       <  1:500204/141‑5 (MQ=255)                                                                                                                                     agtagtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGAAAAg     <  1:418382/141‑1 (MQ=39)                                                                                                                                        agtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGAAAAGTCa  >  1:254956/1‑141 (MQ=38)                                                                                                                                           |                                                                                                                                          TTAATAGAAAGGGGTTTGACAAAGCTAAAGTGAAGTTTGACGGTATAAACGCAAATTAAATATACTTTTATAGAAAATTAACTCAGGCTGGGACATAAATCAATATTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGAGGGCCCCAACACAGAAGCTGACGAAAAGTCA  >  CP000730/1380369‑1380644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.