New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2709676	7 (0.190)	22 (0.590)	21/278	1.1	74.6%	coding (1251/1812 nt)	oatA	possible acetyltransferase
	?	CP000730	2709689 =	8 (0.210)					coding (1238/1812 nt)	oatA	possible acetyltransferase

AGTAAAGACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTT  >  CP000730/2709538‑2709808                                                                                                                                           |                                                                                                                                     aGTAAAGACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAtt                                                                                                                                    <  1:109632‑M1/141‑3 (MQ=255)         cATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttct                                                                                                                            <  2:57446‑M1/141‑11 (MQ=255)                   atCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttc                                                                                                                  <  2:33073‑M1/141‑21 (MQ=255)                    tCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttca                                                                                                                 <  1:405973‑M1/141‑22 (MQ=255)                      caccaTGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCtctttctt                                                                                                               >  1:255599/1‑141 (MQ=255)                               cGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgcc                                                                                                      <  1:186608‑M1/141‑33 (MQ=255)                                gAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgcca                                                                                                     >  1:79810‑M1/1‑108 (MQ=255)                                gAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCa                                                                                                     >  1:84000/1‑141 (MQ=255)                                  gTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACCACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaag                                                                                                   <  2:413402‑M1/141‑36 (MQ=255)                                    cACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTTTTTTTTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaattt                                                                                                 >  2:40179‑M1/1‑104 (MQ=255)                                       cAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcat                                                                                              <  1:304324‑M1/141‑41 (MQ=255)                                               aGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgt                                                                                      >  2:68006‑M1/1‑93 (MQ=255)                                                gtggtgATGACTTTTTGATATCCTCTTTGCTATTCGCTGTCTGCTTATACTCTTGCTTATCTTTTTTAAAGACGTGTTTCTTCGTTGTTTTCGCTTCCGTCTTCTTCTCTTTATTCCCGTCTTCATGTTATTTGCCAAGTg                                                                                     <  2:14340/141‑1 (MQ=255)                                                           tttttAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcaca                                                                          <  2:329480‑M1/141‑61 (MQ=255)                                                                tatatcCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTCTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgat                                                                     <  2:209710‑M1/140‑66 (MQ=255)                                                                   atCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAg                                                                  <  1:234413/141‑1 (MQ=255)                                                                    tCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGc                                                                 >  2:60481/1‑141 (MQ=255)                                                                                ttCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgcccagtgcatcaaactgtccactgagcacaacgatagacggaaccaataat                                                     >  1:206249‑M1/1‑60 (MQ=255)                                                                                    cTGTCTGCTTATCTTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGaa                                                 <  2:232489/141‑1 (MQ=255)                                                                                                  tctTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgtt                                   >  1:173970‑M1/1‑42 (MQ=255)                                                                                                      gCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctag                               >  2:234765‑M1/1‑38 (MQ=255)                                                                                                      gCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctag                               <  1:314785‑M1/141‑104 (MQ=255)                                                                                                           tCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctagcaaat                          >  2:270418‑M1/1‑33 (MQ=255)                                                                                                           tCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctagcaaat                          >  2:201204‑M1/1‑33 (MQ=255)                                                                                                                 ttAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctagcaaattgcccc                    <  1:277264‑M1/141‑115 (MQ=255)                                                                                                                 ttAACGACTTTTTTCTTCGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctagcaaattgcccc                    >  1:404556‑M1/1‑27 (MQ=255)                                                                                                                               cttcGTTGTTTTAttctctttcttctcggcttcatgttgtttgccaagtgcatcaaactgtccactgagcacaacgatagacggaaccaataataggataactaacactgttctagcaaattgccccttctttttaggtaa      >  2:276860‑M1/1‑13 (MQ=255)                                                                                                                                  cGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCcttctt   <  2:146833/141‑1 (MQ=255)                                                                                                                                   gttgttTTAttctcttacttctcggcttcatgttgtttgcaaagtgaatcaaactgtccactgagcacaaagatagacggaaccaataataggataaataacactgttctagcaaattgccccttctttttaggtaaaaat  >  2:176796‑M1/1‑9 (MQ=255)                                                                                                                                           |                                                                                                                                     AGTAAAGACATTACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTT  >  CP000730/2709538‑2709808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.