| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2709676 | 7 (0.190) | 22 (0.590) | 21/278 | 1.1 | 74.6% | coding (1251/1812 nt) | oatA | possible acetyltransferase |
| ? | CP000730 | 2709689 = | 8 (0.210) | coding (1238/1812 nt) | oatA | possible acetyltransferase | |||||
ACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGC > CP000730/2709550‑2709822 | agtaaagacattaccaatatccaccatgaccgagtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttatt < 1:109632‑M2/2‑1 (MQ=255) cattaccaatatccaccatgaccgagtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCtctttct < 2:57446‑M2/10‑1 (MQ=255) caccaTGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCtctttctt > 1:255599/1‑141 (MQ=255) atccaccatgaccgagtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTc < 2:33073‑M2/20‑1 (MQ=255) tccaccatgaccgagtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCa < 1:405973‑M2/21‑1 (MQ=255) gAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCa > 1:84000/1‑141 (MQ=255) cgagtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGcc < 1:186608‑M2/32‑1 (MQ=255) gagtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCa > 1:79810‑M2/109‑141 (MQ=255) gtcaccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaaccacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAg < 2:413402‑M2/35‑1 (MQ=255) gtggtgATGACTTTTTGATATCCTCTTTGCTATTCGCTGTCTGCTTATACTCTTGCTTATCTTTTTTAAAGACGTGTTTCTTCGTTGTTTTCGCTTCCGTCTTCTTCTCTTTATTCCCGTCTTCATGTTATTTGCCAAGTg < 2:14340/141‑1 (MQ=255) caccaattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttttttttttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTgccaattt > 2:40179‑M2/105‑138 (MQ=255) caattaatagtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCAt < 1:304324‑M2/40‑1 (MQ=255) agtggtgatgactttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGt > 2:68006‑M2/94‑141 (MQ=255) atCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAg < 1:234413/141‑1 (MQ=255) tCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGc > 2:60481/1‑141 (MQ=255) tttttaatatcctctttgctattcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGcaca < 2:329480‑M2/60‑1 (MQ=255) tatatcctctttgctattcgctgtctgcttatcctcttgcttatctttcttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGAt < 2:209710‑M2/65‑1 (MQ=255) cTGTCTGCTTATCTTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGaa < 2:232489/141‑1 (MQ=255) ttcgctgtctgcttatcctcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCCAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCaataat > 1:206249‑M2/61‑141 (MQ=255) tcttgcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGtt > 1:173970‑M2/43‑141 (MQ=255) gcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAg > 2:234765‑M2/39‑141 (MQ=255) gcttatcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAg < 1:314785‑M2/103‑1 (MQ=255) tcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAAt > 2:270418‑M2/34‑141 (MQ=255) tcttttttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAAt > 2:201204‑M2/34‑141 (MQ=255) ttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGcccc < 1:277264‑M2/114‑1 (MQ=255) ttaacgacttttttcttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGcccc > 1:404556‑M2/28‑141 (MQ=255) cGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCcttctt < 2:146833/141‑1 (MQ=255) cttcgttgttttaTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTaa > 2:276860‑M2/14‑141 (MQ=255) gttgttttaTTCTCTTACTTCTCGGCTTCATGTTGTTTGCAAAGTGAATCAAACTGTCCACTGAGCACAAAGATAGACGGAACCAATAATAGGATAAATAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAAt > 2:176796‑M2/10‑141 (MQ=255) cGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGc > 2:269853/1‑141 (MQ=255) | ACCAATATCCACCATGACCGAGTCACCAATTAATAGTGGTGATGACTTTTTAATATCCTCTTTGCTATTCGCTGTCTGCTTATCCTCTTGCTTATCTTTTTTAACGACTTTTTTCTTCGTTGTTTTAAATTCCGTCTTCTTCTCTTTCTTCTCGGCTTCATGTTGTTTGCCAAGTGCATCAAACTGTCCACTGAGCACAACGATAGACGGAACCAATAATAGGATAACTAACACTGTTCTAGCAAATTGCCCCTTCTTTTTAGGTAAAAATGC > CP000730/2709550‑2709822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |