| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 599691 = | 55 (0.840) | 4 (0.070) | 3/240 | NT | 7.0% | coding (218/1176 nt) | yhaA | M20D subfamily peptidase |
| ? | CP000730 | 599743 = | 55 (0.910) | coding (166/1176 nt) | yhaA | M20D subfamily peptidase | |||||
CTGAGTTATCTTTTGAAGAATTTCAAACACATGATTATATTGTTAACCAATTAAGCCAGTTATCTTGTGATATTGAAACTCCTATCGGCCGCAATGGTATCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/599832‑599691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccattgcGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTCTTTATT > CP000730/599743‑599881 CTGAGTTATCTTTTGAAGAATTTCAAACACATGATTATATTGTTAACCAATTAAGCCAGTTATCTTGTGATATTGAAGCTCCTATCGGCCGCAATGGTATCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTG > 1:416314/1‑141CTGAGTTATCTTTTGAAGAATTTCAAACACATGATTATATTGTTAACCAATTAAGCCAGTTATCTTGTGATATTGAAACTCCTATCGGCCGCAATGGTATCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTG > 2:593337/1‑141 GTATCAAAGCCACATTTAAAGGCTTGGGCACAGGAAGTACAATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGCAATTATTAACAAGATCACACAAGATAT > 2:466744/1‑141 TATCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATT > 2:514362/1‑141 TATCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATT > 2:743463/1‑141 TCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGG > 1:246135/1‑141 TACCATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTT > 1:670766/1‑141 CCATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTtt > 2:486181/1‑139 CATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTCTT < 1:610901/141‑1 CATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTCTT < 1:47561/141‑1 ATTGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCATAAGATAACTTAGGATATTGGTGTAAATAACGTCTGCGTTGAATTGTTTTATTTTCTTT < 2:763228/141‑1 TGCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTCTTTAT < 1:439910/141‑1 GCGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTCTTTATT > 2:464311/1‑141 CTGAGTTATCTTTTGAAGAATTTCAAACACATGATTATATTGTTAACCAATTAAGCCAGTTATCTTGTGATATTGAAACTCCTATCGGCCGCAATGGTATCAAAGCCACATTTAAAGGCTTGGGCACAGGACCTACCATTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/599832‑599691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccattgcGGCCGATAGGAGTTTCAATATCACAAGATAACTGGCTTAATTGGTTAACAATATAATCATGTGTTTGAAATTCTTCAAAAGATAACTCAGGATATTGGTGTAAATAACGTCTGAGTTGAATTGTTTTATTTTCTTTATT > CP000730/599743‑599881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |