| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 961264 | 50 (0.770) | 3 (0.050) | 3/246 | NT | 6.0% | coding (84/525 nt) | spsA | Sec family Type I general secretory pathway S26 family signal peptidase I |
| ? | CP000730 | = 961290 | 47 (0.760) | coding (110/525 nt) | spsA | Sec family Type I general secretory pathway S26 family signal peptidase I | |||||
TTTTGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/961120‑961264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttggtGACATATCATTATTCGGAATGACATGACCAACTATTACAAAAGTTTGTACGAACAGTACAATGATAATAGCAAGTATCAATGAAATCAAATATTTTACAACTTTTTTCACGATGTCACTCCTTTTTCGATCCCATA < CP000730/961290‑961155 TTTTGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGT < 2:650337/141‑1 TTGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGCTCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTG < 1:580866/141‑1 TTGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTG < 1:135288/141‑1 TTGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTG < 2:562317/141‑1 TGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGG < 2:252847/141‑1 GGATTGTTGGAAAAAAGTTAGAACAGCATTTTTTGTTTTTGTAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGT > 2:746747/1‑141 GGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGT > 2:486291/1‑141 GGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGT > 2:386122/1‑141 GTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGT‑‑CATATCATTATTCGGA < 2:637579/141‑1 TATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGTGACATATCATTATTCGGAATGACATGACCAA < 1:676506/141‑1 GTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGTGACATATCATTATTCGGAATGACATGACCAACNATTACAAAAGTTTGTA < 1:739292/141‑1 TTGGTGACATATCATTATTCGGAATGACATGACCAACTATTACAAAAGTTTGTACGAACAGTACAATGATAATAGCAAGTATCAATGAAATCAAATATTTTACAACTTTTTTCACGATGTCACTCCTTTTTCGATCCCATA < 1:349447/141‑1 TTTTGGATTGTTGGAAAAAAGTTAGAACAGCATTTTATGGGATCGAAAAAGGAGTGACATCGTGAAAAAAGTTGTAAAATATTTGATTTCATTGATACTTGCTATTATCATTGTACTGTTCGTACAAACTTTTGTAATAGTTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/961120‑961264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttggtGACATATCATTATTCGGAATGACATGACCAACTATTACAAAAGTTTGTACGAACAGTACAATGATAATAGCAAGTATCAATGAAATCAAATATTTTACAACTTTTTTCACGATGTCACTCCTTTTTCGATCCCATA < CP000730/961290‑961155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |