| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1203821 = | 61 (0.940) | 3 (0.050) | 3/238 | NT | 5.3% | intergenic (+44/‑246) | ileS/yfiE | isoleucine‑‑tRNA ligase/possible lactoylglutathione lyase |
| ? | CP000730 | 1203868 = | 51 (0.850) | intergenic (+91/‑199) | ileS/yfiE | isoleucine‑‑tRNA ligase/possible lactoylglutathione lyase | |||||
AGAATTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1203965‑1203821‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaagagagTTTTTTTGTGAATAAAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGTACAAATTCTCTGAGGCATATAAATGCGTTATAGTTGCTATTCT > CP000730/1203868‑1203999 AGAATTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATTATTATGAAG > 2:696884/1‑141AGAATTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAG > 1:317153/1‑141 GAATTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGA > 2:285464/1‑141 ATTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGTCCGGGAACTGGTTCGTTTGTTTAGGCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGA > 1:75070/1‑141 TTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGAG > 2:457230/1‑141 TTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGAG < 1:541894/141‑1 AAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGAGTTTTTTTGTGAATAAAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGT > 1:215056/1‑141 AAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGAGTTTTTTTGTGAATAAAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGTAC > 2:290493/1‑141 TCAACAAAAACTACAACATG‑‑‑ATGAAGAGAGTTTTTTTGTGAATAAAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGTACAAATTCTCTGAGGCATATAA > 1:35965/1‑141 ATGAAGAGAGTTTTTTTTTTAATATAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGTACAAATTCTCTGAGGCATATAAATGTGTTATAGTTGCTATTt > 2:597461/1‑140 TGAAGAGAGTTTTTTTGTGAATAAAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGTACAAATTCTCTGAGGCATATAAATGCGTTATAGTTGCTATTCT > 1:783144/1‑141 AGAATTTGTACCATTCCTGAATAATTTTTATTTTAGTAAATCGCACATTTTTTACATATATGACCGGTAACTTGGTCATTTTTTTATTCACAAAAAAACTCTCTTCATCATGTCAACAAAAACTACAACATGATTATGAAGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1203965‑1203821‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgaagagagTTTTTTTGTGAATAAAAAAATGACCAAGTTACCGGTCATATATGTAAAAAATGTGCGATTTACTAAAATAAAAATTATTCAGGAATGGTACAAATTCTCTGAGGCATATAAATGCGTTATAGTTGCTATTCT > CP000730/1203868‑1203999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |