New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 1481792 = | 50 (0.770) | 3 (0.050) | 3/242 | NT | 6.2% | coding (20232/31266 nt) | ebh | extracellular matrix binding protein |
? | CP000730 | 1481833 = | 44 (0.720) | coding (20191/31266 nt) | ebh | extracellular matrix binding protein |
GATCCATCTGCAGTAACACAAGCAGCTAATCAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1481827‑1481792 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGTT > CP000730/1481833‑1481970 GATCCATCTGCAGTAACACAAGCAGCTAATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTA > 1:140459/1‑141 ATCCATCTGCAGTAACACAAGCAGCTAATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCA < 1:101362/118‑1 ATCCATCTGCAGTAACACAAGCAGCTAATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCA > 2:101362/1‑118 ATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCG < 1:243988/141‑1 AGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGT < 1:515441/141‑1 GTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCAGTTTGGTTATCTCTATTTTCATCAACATATGGTTGACGCGCTTTTACATCATCTTTTTTCTCCTTAATATTTCTTAGTT > 2:17370/1‑141 GATCCATCTGCAGTAACACAAGCAGCTAATCAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1481827‑1481792 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGTT > CP000730/1481833‑1481970 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |