New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1481792 =	50 (0.770)	3 (0.050)	3/242	NT	6.2%	coding (20232/31266 nt)	ebh	extracellular matrix binding protein
	?	CP000730	1481833 =	44 (0.720)					coding (20191/31266 nt)	ebh	extracellular matrix binding protein

AGCATTATTTAAATGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGTTGAT  >  CP000730/1481693‑1481973                                                                                                                                             |                                                                                                                                             aGCATTATTTAAATGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAgtgt                                                                                                                                              >  2:436169/1‑141 (MQ=255)     ttattTAAATGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGc                                                                                                                                          >  1:572144/1‑141 (MQ=255)      tattTAAATGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCt                                                                                                                                         <  2:220399/141‑1 (MQ=255)       attTAAATGACTTAATTGGTGGATGTTAGCACTCGTTTCATGCGTTTTAGTCTCTAAGTCTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTg                                                                                                                                        <  1:662158/141‑1 (MQ=255)            aaTGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCg                                                                                                                                   >  1:625222/1‑141 (MQ=255)            aaTGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCg                                                                                                                                   >  1:669531/1‑141 (MQ=255)            aaTGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCg                                                                                                                                   >  1:277181/1‑141 (MQ=255)             aTGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGt                                                                                                                                  <  1:118741/141‑1 (MQ=255)              tGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGtt                                                                                                                                 <  1:178714/141‑1 (MQ=255)                   tAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCAtt                                                                                                                            <  1:597694/141‑1 (MQ=255)                               gTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTc                                                                                                                >  1:39750/1‑141 (MQ=255)                                  aGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGc                                                                                                             <  1:654327/141‑1 (MQ=255)                                   gCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCa                                                                                                            <  1:529052/141‑1 (MQ=255)                                   gCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCa                                                                                                            <  2:524718/141‑1 (MQ=255)                                            tCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAAct                                                                                                   >  1:177336/1‑141 (MQ=255)                                               tGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAActgct                                                                                                <  1:700790/141‑1 (MQ=255)                                                gCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAActgctt                                                                                               >  2:302117/1‑140 (MQ=255)                                                gCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAActgctg                                                                                               >  1:553042/1‑141 (MQ=255)                                                gCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAActgctg                                                                                               <  1:89882/141‑1 (MQ=255)                                                  tttttATTCTCTAATTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTTGTTGCATTAATGATATTTTCAGCATTTGTAACTGCtgta                                                                                             >  2:409505/1‑141 (MQ=255)                                                      tATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCtgtattgt                                                                                         <  2:640958/141‑1 (MQ=255)                                                      tATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCtgtattgt                                                                                         <  2:133726/141‑1 (MQ=255)                                                           gCTAAGTTTTGTGCACCATTATGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCATATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCtgttgaaaatatt                                                                                    <  2:477621/141‑11 (MQ=255)                                                              aaGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCAttt                                                                                 >  1:454666/1‑141 (MQ=255)                                                                  tttGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGtt                                                                             <  1:177405/141‑1 (MQ=255)                                                                  tttGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGtt                                                                             <  1:185605/141‑1 (MQ=255)                                                                   ttGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGttt                                                                            >  1:132218/1‑141 (MQ=255)                                                                    tgtgCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTa                                                                           >  2:96451/1‑141 (MQ=255)                                                                      tgCACCATTAAGCTCAGTTTTGTTATTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGTTCAAGTGGCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTAtc                                                                         <  2:245307/141‑1 (MQ=255)                                                                              tAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGtt                                                                             <  2:683154/129‑1 (MQ=255)                                                                              tAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGtt                                                                             >  1:683154/1‑129 (MQ=255)                                                                                aGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCa                                                               <  1:173212/141‑1 (MQ=255)                                                                                 gcgcAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCAt                                                              >  1:237171/1‑141 (MQ=255)                                                                                 gcgcAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCAt                                                              >  2:523249/1‑141 (MQ=255)                                                                                       ttttGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACat                                                        <  1:246537/141‑1 (MQ=255)                                                                                           gTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACGTATgg                                                    <  2:625222/141‑1 (MQ=255)                                                                                           gTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATgg                                                    >  2:81824/1‑141 (MQ=255)                                                                                              aGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTg                                                 <  1:428352/141‑1 (MQ=255)                                                                                                 gCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACt                                              <  1:600868/141‑1 (MQ=255)                                                                                                         gatccatctgcagtaacacaagcagctaatcaagtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTa                                      >  1:140459‑M2/37‑141 (MQ=255)                                                                                                          atccatctgcagtaacacaagcagctaatcaagtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCa                                                            <  1:101362‑M2/83‑1 (MQ=255)                                                                                                          atccatctgcagtaacacaagcagctaatcaagtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCa                                                            >  2:101362‑M2/36‑118 (MQ=255)                                                                                                             aGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTAcatc                                  >  1:648350/1‑141 (MQ=255)                                                                                                              gctgctTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTAcatca                                 >  1:185977/1‑141 (MQ=255)                                                                                                                tgctTGTCTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACatcatc                               >  1:621335/1‑141 (MQ=255)                                                                                                                    tgtgTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTa                           <  2:242519/141‑1 (MQ=255)                                                                                                                     gtgtTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTAt                          >  1:600879/1‑141 (MQ=255)                                                                                                                         tACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGc                      <  2:86945/141‑1 (MQ=255)                                                                                                                              cAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATAc                 <  1:659901/141‑1 (MQ=255)                                                                                                                                 aTGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTAt              <  1:184344/141‑1 (MQ=255)                                                                                                                                     atcaagtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCg          <  1:243988‑M2/133‑1 (MQ=255)                                                                                                                                         agtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGt      <  1:515441‑M2/137‑1 (MQ=255)                                                                                                                                          gtgTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCAGTTTGGTTATCTCTATTTTCATCAACATATGGTTGACGCGCTTTTACATCATCTTTTTTCTCCTTAATATTTCTTAGtt     >  2:17370‑M2/4‑141 (MQ=255)                                                                                                                                             tCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGTTGAt  <  1:415509/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             AGCATTATTTAAATGACTTAATTGGTTGATGTTAGCAGTCGTTTCTTGCTTTTTATTCGCTAAGTTTTGTGCACCATTAAGCGCAGTTTTGTTAGTGCTCACTTGATTAGCTGCTTGTGTTACTGCAGATGGATCAAGTGTCGGCTGACTCGTTGCATTAATGATATTTTCAGCATTTGTAACTGCTGTATTGTATGCATTTTGTTTATCTCTATCTGCATCAACATATGGTTGACTCGCTTTTACATCATCTTTATTCGCAATACTATTTCGAAGTTGAT  >  CP000730/1481693‑1481973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.