| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1619594 = | 62 (0.950) | 3 (0.050) | 3/244 | NT | 5.0% | coding (813/816 nt) | proC | pyrroline‑5‑carboxylate reductase |
| ? | CP000730 | 1619661 = | 55 (0.890) | intergenic (+64/+41) | proC/rnz | pyrroline‑5‑carboxylate reductase/ribonuclease Z | |||||
TAATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1619738‑1619594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTG > CP000730/1619661‑1619796 TAATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTT < 1:735960/141‑1TAATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTT < 1:141427/141‑1TAATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTT < 1:82051/141‑1 ATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTT > 2:5682/1‑141 ATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTT > 1:220718/1‑141 TTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTA > 2:128975/1‑141 TTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTA < 1:524733/141‑1 TTTGGAAAAGATTTGTATAGTTTTAAAATCGAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAACTTATAAAAATAACCCGTCAAACCCCGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTAT < 2:783254/141‑1 AAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTT > 1:696127/1‑141 ATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAA > 1:557281/1‑141 CACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCT < 2:557281/141‑1 TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTC < 1:216094/141‑1 TTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTG < 1:11079/141‑1 TAATTTTGTAAAAGATTTTGATAGTTTTAAAATCTAATGACAAAGTAATAAACAATGCTTGCCAAATAACAATAAATTATAAAAATAACCCGTCAAACACAGTGCTTGCGATGATGCATACATGTGTTGGCGGGTTTGTTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1619738‑1619594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTG > CP000730/1619661‑1619796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |