| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1789630 = | 54 (0.830) | 4 (0.070) | 4/236 | NT | 7.7% | intergenic (‑111/+59) | gapB/coaE | glyceraldehyde‑3‑phosphate dehydrogenase (phosphorylating)/dephospho‑CoA kinase |
| ? | CP000730 | 1789673 = | 47 (0.790) | intergenic (‑154/+16) | gapB/coaE | glyceraldehyde‑3‑phosphate dehydrogenase (phosphorylating)/dephospho‑CoA kinase | |||||
TAAACTTGAATTAAAACAAAACCTTGAGAGATTGTTAGAAGAAGAAGGTTATATTGAAAAGCCGAATTACGGAGAAGAAGATTAATATTACACTATAAATAAGTCATTACTTTACGTACGCGTTGATGTATGTAAGTAATGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1789773‑1789630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtaatgactTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATCGATAACATGATCGGCCATTCGGCT > CP000730/1789673‑1789811 TAAACTTGAATTAAAACAAAACCTTGAGAGATTGTTAGAAGAAGAAGGTTATATTGAAAAGCCGAATTACGGAGAAGAAGATTAATATTACACTATAAATAAGTCATTACTTTACGTACGCGTTGATGTATGTAAGTAATG > 2:756667/1‑141 ACTTGAATTAAAACAAAACCTTGAGAGATTGTTAGAAGAAGAAGGTTATATTGAAAAGCCGAATTACGGAGAAGAAGATTAATATTACACTATAAATAAGTCATTACTTTACGTACGCGTTGATGTATGTAAGTAATGACT > 2:180330/1‑141 GAGAAGAAGATTAATATTACACTATAAATAAGTCATTACTTTACGTACGCGTTGATGTATGTAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAAC > 1:70040/1‑141 CATTACTTTACGTACGCGTTGATGTATGTAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTA > 1:148997/1‑141 TTTACGTACGCGTTGATGTATGTAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCT > 1:184909/1‑141 CGCGTTGATGTATGTAAGTAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATC > 1:126761/1‑141 TAATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATCGATAACATGATCGGCCAT < 2:497059/141‑1 AATGACTTATTTATAGTGTAATATTAATCTTCTTCTCCCTAATTCGACTTTACAATATAACCTTCTTCTTCTAACAATATATAAAGGTTGTGTTTTAATTCAAGTTTATACCCTAAATTATTGATAACATGATAGGCTATT < 2:242264/141‑1 ACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATCGATAACATGATCGGCCATTCGGC > 2:398615/1‑141 ACTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATCGATAACATGATCGGCCATTCGGC < 2:420811/141‑1 ACTTATTTATAGTGTAATATTAATCTTCTTCTCCGT < 2:38490/36‑1 ACTTATTTATAGTGTAATATTAATCTTCTTCTCCGT > 1:38490/1‑36 CTTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATCGATAACATGATCGGCCATTCGGCT < 1:243057/141‑1 TAAACTTGAATTAAAACAAAACCTTGAGAGATTGTTAGAAGAAGAAGGTTATATTGAAAAGCCGAATTACGGAGAAGAAGATTAATATTACACTATAAATAAGTCATTACTTTACGTACGCGTTGATGTATGTAAGTAATGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1789773‑1789630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtaatgactTATTTATAGTGTAATATTAATCTTCTTCTCCGTAATTCGGCTTTTCAATATAACCTTCTTCTTCTAACAATCTCTCAAGGTTTTGTTTTAATTCAAGTTTATCCCCTAAATTATCGATAACATGATCGGCCATTCGGCT > CP000730/1789673‑1789811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |