| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2533545 | 74 (1.130) | 4 (0.070) | 4/240 | NT | 5.1% | intergenic (+41/+56) | murN/tcyC | FemAB family peptidoglycan biosynthesis protein/ABC superfamily ATP binding cassette transporter, ABC protein |
| ? | CP000730 | = 2533585 | 79 (1.300) | intergenic (+81/+16) | murN/tcyC | FemAB family peptidoglycan biosynthesis protein/ABC superfamily ATP binding cassette transporter, ABC protein | |||||
AAAAAAGGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2533397‑2533545‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaaccacgTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTGATAGGCT < CP000730/2533585‑2533446 AAAAAAGGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAA < 2:488188/141‑1 AAAAAGGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAG > 1:268557/1‑141 AAGGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAAC > 2:43273/1‑141 GGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCA > 2:198155/1‑141 GTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCAC > 2:151592/1‑141 CTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCAC < 1:443491/107‑1 CTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCAC > 2:443491/1‑107 TATTAAGCCTATCAATCCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACAT < 1:650624/141‑1 GCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCG < 2:533820/141‑1 CCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCACGCATCATG‑‑‑TA‑TATGGCGATGAAGCCATATACATGATGCGTGGTT < 2:785304/141‑1 CTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTG < 1:535130/141‑1 AGAACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATTCATGATGCGTGTTTCTTTGTTAGGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTT < 1:155051/141‑1 GAACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTG > 1:53638/1‑141 GAACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTG > 1:465734/1‑141 ACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTGAT > 1:527310/1‑141 ACCACGTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTGAT > 1:72158/1‑141 GTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTGATAGGCT < 2:44246/141‑1 AAAAAAGGTTTTAACGCACATGTAGAAGAGTATATCGGTGACTTTATTAAGCCTATCAAACCATTACTATATAAGGTACAAACGTACTTAAATCATAAACGTCGTTAAAATATCGCTCCAAGATTATGACAACATAACAAAGAACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2533397‑2533545‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agaaccacgTATCATGTTTTAGTATGGCGATGAAGCCATATACATGATGCGTGGTTCTTTGTTATGTTGTCATAATCTTGGAGCGATATTTTAACGACGTTTATGATTTAAGTACGTTTGTACCTTATATAGTAATGGTTTGATAGGCT < CP000730/2533585‑2533446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |