| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2744105 = | 73 (1.120) | 4 (0.070) | 4/238 | NT | 6.0% | intergenic (+42/+151) | fdaB/mqo2 | fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor) |
| ? | CP000730 | 2744143 = | 58 (0.960) | intergenic (+80/+113) | fdaB/mqo2 | fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor) | |||||
TTCTAATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATGAGT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2744254‑2744105‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtatgagt‑cTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTC > CP000730/2744143‑2744279 TTCTAATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACAT < 1:480699/141‑1TTCTAATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACAT < 1:481142/141‑1 TCTAATAGCCATATTTAAAATCGGGCAACTGAGAAATCTTAAAGATATTTCAGATGTCCGATTTTTTTAAGTAATCTAATACATACGACAAAATCAAGTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCAAATG > 2:158334/1‑141 AATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTAT < 1:250474/141‑1 ATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATG < 1:217190/141‑1 ATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATG < 1:20275/141‑1 ATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACAATAAACAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATG < 2:190842/141‑1 ATAGCTATATTTAAAATCGAACAACTTAGAAATATTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATAAGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATG > 2:349226/1‑141 TAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATGA < 1:629372/141‑1 TAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATGA < 1:352812/141‑1 AGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATGAG < 1:279310/141‑1 ATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATGAGTCCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATT > 1:492590/1‑141 GACTCATACACAATGCCTTTAAAGCACATGTATGAGT‑CTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG > 1:179476/1‑99 GACTCATACACAATGCCTTTAAAGCACATGTATGAGT‑CTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG < 2:179476/99‑1 ATACACAATGCCTTTAAAGCACATGTATGAGTCCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCacg > 1:90318/1‑138 TGTATGAGT‑CTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTATATGACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACC < 1:546369/141‑1 TGTATGAGT‑CTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACC < 1:311370/141‑1 GAGT‑CTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAgtt < 2:520436/141‑4 AGT‑CTTCTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTC < 2:749674/141‑1 TTCTAATAGCTATATTTAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTTTTACGTAATCTAATACATACGGCAAAATCAACTTTAATCAAAAAAGACTCATACACAATGCCTTTAAAGCACATGTATGAGT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2744254‑2744105‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtatgagt‑cTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTC > CP000730/2744143‑2744279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |