New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2744105 =	73 (1.120)	4 (0.070)	4/238	NT	6.0%	intergenic (+42/+151)	fdaB/mqo2	fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor)
	?	CP000730	2744143 =	58 (0.960)					intergenic (+80/+113)	fdaB/mqo2	fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor)

CTAGTGATTTAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATA  >  CP000730/2743966‑2744244                                                                                                                                            |                                                                                                                                             cTAGTGATTTAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAAATACTAAAAAGG‑a                                                                                                                                            <  2:63511/141‑1 (MQ=255)  tAGTGATTTAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑Ac                                                                                                                                           >  2:42911/1‑141 (MQ=255)   gaattaggttactacgaaaactaaattctaatagctatatttaaaatcggacaactgagaaatcttaaagatttttcagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaagaaG‑ACt                                                                                                                                          <  2:749674‑M1/4‑1 (MQ=255)    aactaggttactacgaaaactaaattctaatagctatatttaaaatcggacaactgagaaatcttaaagatttttcagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaaaaaG‑ACTc                                                                                                                                         <  2:520436‑M1/5‑1 (MQ=255)      gATTTAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGATGATGCTGTAGAATCAATCTACGACGAAAAAAAAAAAAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCAt                                                                                                                                       <  2:695895/141‑1 (MQ=255)       aTTTAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATa                                                                                                                                      <  2:572019/141‑1 (MQ=255)        tttAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATAc                                                                                                                                     <  2:422466/141‑1 (MQ=255)         ggttactacgaaaactaaattctaatagctatatttaaaatcggacaactgagaaatcttaaagatttttcagctgtccgatttttttacgtcatataatacatacggcaaaatcaactttaatcaaaaaaG‑ACTCATACa                                                                                                                                    <  1:546369‑M1/10‑1 (MQ=255)         ggttactacgaaaactaaattctaatagctatatttaaaatcggacaactgagaaatcttaaagatttttcagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaaaaaG‑ACTCATACa                                                                                                                                    <  1:311370‑M1/10‑1 (MQ=255)          tAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGTCGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTTTTATTAACTACTGAAAAGG‑ACTCGTACAt                                                                                                                                   >  2:74747/1‑141 (MQ=255)           aaGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACAtg                                                                                                                                  <  1:565271/141‑1 (MQ=255)           aaGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACAtg                                                                                                                                  <  2:269055/141‑1 (MQ=255)           aaGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACAtg                                                                                                                                  <  1:278315/141‑1 (MQ=255)                 tGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCttt                                                                                                                            <  1:436564/141‑1 (MQ=255)                   aTCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTaa                                                                                                                          >  2:540595/1‑141 (MQ=255)                    tCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTaaa                                                                                                                         >  1:34511/1‑141 (MQ=255)                      aaTCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACAATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAgg                                                                                                                       <  2:344800/141‑1 (MQ=255)                       aTCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAGGAAATACTAATTTAGATATTAAATTATTGTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGc                                                                                                                      >  1:273218/1‑141 (MQ=255)                       aTCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTGTTTGATATAAGCTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGc                                                                                                                      <  1:686326/141‑1 (MQ=255)                       aTCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGCAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGc                                                                                                                      <  2:610914/141‑1 (MQ=255)                       aTCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCAACAGAAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGc                                                                                                                      <  2:495459/141‑1 (MQ=255)                         cTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCAt                                                                                                                    <  2:686848/141‑1 (MQ=255)                           aaaGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATtg                                                                                                                  >  1:108904/1‑141 (MQ=255)                           aaaGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATtg                                                                                                                  >  2:592603/1‑141 (MQ=255)                                 cgtgctatatttaaaatcggacaactgagaaatcttaaagatttttcagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaaaaaGGACTCATACATGTGCTTTAAAGGCATTGTGTAt                                                                                                             >  1:90318‑M1/108‑141 (MQ=255)                                  aaTTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGa                                                                                                           <  1:365723/141‑1 (MQ=255)                                   aTTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAg                                                                                                          >  2:268619/1‑141 (MQ=255)                                    ttCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGt                                                                                                         <  1:149219/141‑1 (MQ=255)                                    ttCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGt                                                                                                         <  1:126501/141‑1 (MQ=255)                                         tAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCtttt                                                                                                    <  1:455876/141‑1 (MQ=255)                                          aaaGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCttttt                                                                                                   >  1:561890/1‑141 (MQ=255)                                          aaaGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCttttt                                                                                                   <  1:119130/141‑1 (MQ=255)                                            aGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTg                                                                                                 <  2:137653/141‑1 (MQ=255)                                               aatcggacaactgagaaatcttaaagatttttcagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaaaaaGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGAt                                                                                               >  1:492590‑M1/94‑141 (MQ=255)                                                ttAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTTTTTTTTTTTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTa                                                                                             >  2:564220/1‑141 (MQ=255)                                                ttAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTa                                                                                             >  2:356279/1‑141 (MQ=255)                                                 tAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTTTTTTTTTTTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTaa                                                                                            >  2:118352/1‑141 (MQ=255)                                                 tAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTaa                                                                                            >  1:235586/1‑141 (MQ=255)                                                   ggTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAg                                                                                          >  2:92592/1‑141 (MQ=255)                                                   ggTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAg                                                                                          <  2:490358/141‑1 (MQ=255)                                                     tGATGCTGTAGAATCGATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATCAACTACTAAAAAGG‑ACTCATACATATGCTTTCAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGtt                                                                                        <  1:675137/141‑1 (MQ=255)                                                         gCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGAtt                                                                                    <  2:568341/141‑1 (MQ=255)                                                         gCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTAATAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGAtt                                                                                    <  2:317970/141‑1 (MQ=255)                                                          cTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGAttt                                                                                   >  1:573180/1‑141 (MQ=255)                                                             tacaatcaatcTACGACGCATCTGTAAACAAACACTCATTCATACATTAAAATATTTATTAATCTAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTCTATGAGTCTTTTTTGATTACAGTTNATTTTGc                                                                                >  2:587815/4‑141 (MQ=255)                                                              aGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑TCTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGcc                                                                               <  1:323574/141‑1 (MQ=255)                                                               aaatcaatcTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCg                                                                              <  2:518855/140‑1 (MQ=255)                                                                 atcaatcTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCgta                                                                            <  1:697023/141‑1 (MQ=255)                                                                   caatcTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCgtatg                                                                          >  1:98989/1‑141 (MQ=255)                                                                      tcTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCgtatgtat                                                                       <  2:125322/141‑1 (MQ=255)                                                                      tcTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCgtatgtat                                                                       <  2:464361/141‑1 (MQ=255)                                                                      tcTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCgtatgtat                                                                       >  2:578511/1‑141 (MQ=255)                                                                         acgacgCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAg                                                                    <  2:68042/141‑1 (MQ=255)                                                                           gacgCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGTTTATAGTTGATTTTGCCGTATGTATTAGAt                                                                  >  2:434455/1‑141 (MQ=255)                                                                               cagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaaaaaG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTc                                                                                                        <  2:179476‑M1/38‑1 (MQ=255)                                                                               cagctgtccgatttttttacgtaatctaatacatacggcaaaatcaactttaatcaaaaaaG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTc                                                                                                        >  1:179476‑M1/62‑99 (MQ=255)                                                                                     tAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTaaaaa                                                        <  1:251488/141‑1 (MQ=255)                                                                                        aCAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAAt                                                     <  1:385430/141‑1 (MQ=255)                                                                                           aaaaCTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCgg                                                  >  1:684839/1‑141 (MQ=255)                                                                                            aaaCTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATAAGCAATAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTaaaaaaaaaaaa                                                 <  2:505546/141‑6 (MQ=255)                                                                                             aaCTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTTATGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGAc                                                >  2:681588/1‑141 (MQ=255)                                                                                                tAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGc                                             <  2:34511/141‑1 (MQ=255)                                                                                                 aaTTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCt                                            >  1:534757/1‑141 (MQ=255)                                                                                                  aTTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGCTTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTg                                           >  2:305621/1‑141 (MQ=255)                                                                                                      ataCATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGaaaa                                       <  1:245001/141‑1 (MQ=255)                                                                                                           ttAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTACTAGATTACGTAAAAAAATTGGACAGCTGAAAAATCtt                                  >  2:180222/1‑141 (MQ=255)                                                                                                              aaCTATTTTTTGTTATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTTTTTTATTTTGATTTTTCTGTATGTCTTATATTACTTATATAAATCGGAAAGTTGAAAAATCTTTat                               >  2:548361/1‑140 (MQ=255)                                                                                                              aaCTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTaa                               <  2:688195/141‑1 (MQ=255)                                                                                                              aaCTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTaa                               <  2:688194/141‑1 (MQ=255)                                                                                                                   ttttttGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAATGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGAttt                          >  2:371779/1‑141 (MQ=255)                                                                                                                   ttttttGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGAttt                          >  2:231951/1‑141 (MQ=255)                                                                                                                    tttttGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAACTGAGAAATCTTAAAGAtttt                         <  2:383272/141‑2 (MQ=255)                                                                                                                    tttttGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAACTGAGAAATCTTAAAGAtttt                         <  2:383276/141‑2 (MQ=255)                                                                                                                       tttttttttttttttaAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTATAGTTGATTTTGCCGTATTTATTAGTTTACGTAAAAAAATTGGACAGCTGAAAAATCTTTAAGATTTCTCa                      >  2:778683/15‑141 (MQ=255)                                                                                                                       ttGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCa                      <  1:92592/141‑1 (MQ=255)                                                                                                                       ttGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCa                      >  2:133562/1‑141 (MQ=255)                                                                                                                          atatAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGtt                   >  1:87944/1‑141 (MQ=255)                                                                                                                             taAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTc                <  1:79242/141‑1 (MQ=255)                                                                                                                              aaaCTACTAAAAAGG‑AATCATCCATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGAAAGATGAAAAATCTTTAAGATTTCTCAGTTGTcc               <  1:363233/141‑1 (MQ=255)                                                                                                                                     taAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTa        >  1:129661/1‑141 (MQ=255)                                                                                                                                     taAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTa        <  1:67016/141‑1 (MQ=255)                                                                                                                                      aaaaaGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCtttttt                                                                                                  >  1:502963/1‑50 (MQ=255)                                                                                                                                      aaaaaGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCtttttt                                                                                                  <  2:502963/50‑1 (MQ=255)                                                                                                                                       aaaaGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTaaa      >  2:144681/1‑141 (MQ=255)                                                                                                                                           gg‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGTACAGCTGAAAAAGCTTTAAGATTTCTCAGTTGTCCGATTTTAAAtata  >  1:231320/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                             CTAGTGATTTAAGAGCTGATCAATCTAAAGAAGAATTCGATAAAGCTTTAGGTGATGCTGTAGAATCAATCTACGACGCATCTGTAAACAAAAACTAATTTATACATTAAACTATTTTTTGATATAAACTACTAAAAAGG‑ACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATA  >  CP000730/2743966‑2744244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.