New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1617429	63 (0.970)	4 (0.060)	4/248	NT	6.5%	intergenic (+24/+192)	yqkF/USA300HOU_1502	dehydrogenase/hypothetical protein
	?	CP000730	= 1617470	54 (0.860)					intergenic (+65/+151)	yqkF/USA300HOU_1502	dehydrogenase/hypothetical protein

CGTCGACCAATTAAAAGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCTCACGCATCAGTATTTAGTAATTTCGCCT  >  CP000730/1617291‑1617569                                                                                                                                           |                                                                                                                                             cGTCGACCAATTAAAAGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAAcagc                                                                                                                                            <  1:114666/141‑1 (MQ=255)  gTCGACCAATTAAAAGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAAcagca                                                                                                                                           >  2:476542/1‑141 (MQ=255)      aCCAATTAAAAGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAacagcag                                                                                                                                       >  1:354507‑M1/1‑134 (MQ=255)             aaaaGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGt                                                                                                                                <  1:229741/141‑1 (MQ=255)               aaGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGttt                                                                                                                              >  2:168513/1‑141 (MQ=255)               aaGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGttt                                                                                                                              >  2:168520/1‑141 (MQ=255)                  aaaaTATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGTGTTTCAt                                                                                                                           <  1:623495/141‑1 (MQ=255)                       atTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATaa                                                                                                                      >  2:31498/1‑141 (MQ=255)                        ttGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATaaa                                                                                                                     >  2:616157/1‑141 (MQ=255)                         tGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATaaaa                                                                                                                    >  1:62594/1‑141 (MQ=255)                          gAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTAGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATaaaaa                                                                                                                   >  1:750628/1‑141 (MQ=255)                            aaaCTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATg                                                                                                                 >  2:471597/1‑141 (MQ=255)                             aaCTATCATACTAAAATTAATTTAGATCAGATTAAAACAGCAATAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAACAGAATGAGACGTTTcttgattaatgttt                                                                                                                <  2:404124/141‑14 (MQ=255)                                 aTCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTa                                                                                                            <  2:711351/141‑1 (MQ=255)                                    aTACTAAAGTTAGTTTAGATCAGATTAAAACATCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTActg                                                                                                         <  1:430068/141‑1 (MQ=255)                                    aTACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTActg                                                                                                         <  1:349506/141‑1 (MQ=255)                                      aCTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTActgct                                                                                                       <  1:520568/141‑1 (MQ=255)                                      aCTAAAGTTAGTTTAGANCAGATTAAAANAGCANGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTAatgct                                                                                                       >  1:492990/1‑141 (MQ=255)                                        tAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAacagcagtaaggcatttttataatgaaacgcctcatgctgc                                                                                                     <  2:392536‑M1/141‑42 (MQ=255)                                         aaaGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTt                                                                                                    >  2:143498‑M2/1‑140 (MQ=255)                                          aaGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAacagcagtaaggcatttttataatgaaacgcctcatgctgctg                                                                                                   <  1:582891‑M1/141‑44 (MQ=255)                                            gttagttTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAacagcagtaaggcatttttataatgaaacgcctcatgctgctgtt                                                                                                 <  2:354507‑M1/141‑46 (MQ=255)                                            gttagttTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTtgtt                                                                                                 <  1:296983‑M2/141‑5 (MQ=255)                                               agttTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTAt                                                                                              >  1:8857/1‑141 (MQ=255)                                               agttTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTAt                                                                                              >  1:53424/1‑141 (MQ=255)                                               agttTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTAt                                                                                              >  2:680656/1‑141 (MQ=255)                                               agttTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTAt                                                                                              >  2:715379/1‑141 (MQ=255)                                                   tAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTAc                                                                                          >  2:12681/1‑141 (MQ=255)                                                          gATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGc                                                                                   <  1:163307/141‑1 (MQ=255)                                                          gATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTACATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGc                                                                                   <  2:242427/141‑1 (MQ=255)                                                           aTTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCt                                                                                  <  2:4027/141‑1 (MQ=255)                                                           aTTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCt                                                                                  >  1:454994/1‑141 (MQ=255)                                                            ttAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCta                                                                                 >  1:782033/1‑141 (MQ=255)                                                               aaaCAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATaa                                                                              >  1:209917/1‑141 (MQ=255)                                                                aaCAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAAt                                                                             <  1:689146/141‑1 (MQ=255)                                                                aaCAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAAt                                                                             >  2:94359/1‑141 (MQ=255)                                                                 aCAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAAtt                                                                            >  2:457167/1‑141 (MQ=255)                                                                  cAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAAttt                                                                           <  2:354530/141‑1 (MQ=255)                                                                   aGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATtta                                                                          >  1:36144/1‑141 (MQ=255)                                                                   aGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATtta                                                                          <  1:133870/141‑1 (MQ=255)                                                                    gCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttat                                                                         >  1:84994/1‑141 (MQ=255)                                                                    gCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttat                                                                         >  2:564080/1‑141 (MQ=255)                                                                      atgggCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTACAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAAAGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatga                                                                       <  1:378127/137‑1 (MQ=255)                                                                        gagtctggatAATGGATCTGGTATATAACAGTCATCTAGTGTAGAAGTCATTTTCATTAATCAAAACAGCAACATGAGTCTTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttgtgatt                                                                     <  2:85867/132‑1 (MQ=255)                                                                        gagCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTActg                                                                                                         <  1:361673/105‑1 (MQ=255)                                                                        gagCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTActg                                                                                                         >  2:361673/1‑105 (MQ=255)                                                                        gaacttgtatAAAGGATTTGGAATAAACCAATCAATTAGTGTAGAAGTCTTTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCTTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgatt                                                                     <  1:513987/132‑1 (MQ=255)                                                                         agCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgatta                                                                    >  1:97890/1‑141 (MQ=255)                                                                         agCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgatta                                                                    >  2:654266/1‑141 (MQ=255)                                                                          gCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgattat                                                                   >  1:62384/1‑141 (MQ=255)                                                                           cTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgattatg                                                                  <  1:383750/141‑1 (MQ=255)                                                                           cTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGAGTTTAATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgattatg                                                                  <  2:523882/141‑1 (MQ=255)                                                                            tCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATttatgattatga                                                                 >  1:197994/1‑141 (MQ=255)                                                                                gtAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTAc                                                             >  2:476213/1‑141 (MQ=255)                                                                                   aaGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCa                                                          >  2:161430/1‑141 (MQ=255)                                                                                     ggATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACt                                                        >  2:102270/1‑141 (MQ=255)                                                                                            gAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATa                                                 <  1:108732/141‑1 (MQ=255)                                                                                            gAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATa                                                 <  1:92500/141‑1 (MQ=255)                                                                                             aaTATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAg                                                >  1:222721/1‑141 (MQ=255)                                                                                              atatACCAATCATTTAGTGTAGAAGTCATTTTCTGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGa                                               <  1:586250/141‑1 (MQ=255)                                                                                                 taCCACTCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGTCGTTTCAATATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAAt                                            <  2:60533/141‑1 (MQ=255)                                                                                                 taCCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAAt                                            <  2:390962/141‑1 (MQ=255)                                                                                                     aaTCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTaaa                                        >  1:175760/1‑141 (MQ=255)                                                                                                        cATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCg                                     >  1:76492/1‑141 (MQ=255)                                                                                                             aGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTc                                >  1:249286/1‑141 (MQ=255)                                                                                                               tgtAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCt                              <  1:739054/141‑1 (MQ=255)                                                                                                               tgtAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCt                              <  2:267245/141‑1 (MQ=255)                                                                                                               tgtAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCt                              <  2:685536/141‑1 (MQ=255)                                                                                                               tgtAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCt                              <  2:420787/141‑1 (MQ=255)                                                                                                                  aGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCTCAc                           >  1:359082/1‑141 (MQ=255)                                                                                                                                  aataaAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCTCACGCATCAGTATTTAGTa           >  1:341644/1‑141 (MQ=255)                                                                                                                                       aaaCAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCTCACGCATCAGTATTTAGTAATTTc      <  2:253082/141‑1 (MQ=255)                                                                                                                                        aacaacagcagtaaggcatttttataatgaaacgcctcatgctgctgtttttattactgaaaatgacttctacactaaatgattggtatattccaaatcctttacacgagctcttgctgttttaatctgatctaaactaac     <  1:296983‑M1/141‑138 (MQ=255)                                                                                                                                        aaCAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTtgtttttattactgaaaatgacttctacactaaatgattggtatattccaaatcctttacacgagctcttgctgttttaatctgatctaaactaac     <  2:354507‑M2/141‑97 (MQ=255)                                                                                                                                        aaCAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATACTTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCTCACGCATCAGTATTTAGTAATTTCg     <  1:366711/141‑1 (MQ=255)                                                                                                                                          cagcagCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTtgtttttattactgaaaatgacttctacactaaatgattggtatattccaaatcctttacacgagctcttgctgttttaatctgatctaaactaactt   <  1:582891‑M2/141‑99 (MQ=255)                                                                                                                                           aacagcagtaaggcatttttataatgaaacgcctcatgctgctgtttttattactgaaaatgacttctacactaaatgattggtatattccaaatcctttacacgagctcttgctgttttaatctgatctaaactaacttt  >  2:143498‑M1/1‑1 (MQ=255)                                                                                                                                           |                                                                                                                                             CGTCGACCAATTAAAAGAAAATATTGAAAACTATCATACTAAAGTTAGTTTAGATCAGATTAAAACAGCAAGAGCTCGTGTAAAGGATTTGGAATATACCAATCATTTAGTGTAGAAGTCATTTTCAGTAATAAAAACAGCAGCATGAGGCGTTTCATTATAAAAATGCCTTACTGCTGTTGTTTATGTACAATTCGCTATAATTTATGATTATGATTACTCACTTATGATAGAAATTAAAGCGTTGTCCTCACGCATCAGTATTTAGTAATTTCGCCT  >  CP000730/1617291‑1617569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.