New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	720538 =	78 (1.200)	4 (0.060)	4/246	NT	5.3%	intergenic (+148/‑107)	nupC2/USA300HOU_0666	CNT family concentrative nucleoside transporter/hypothetical protein
	?	CP000730	720578 =	70 (1.130)					intergenic (+188/‑67)	nupC2/USA300HOU_0666	CNT family concentrative nucleoside transporter/hypothetical protein

CAGGCATGTCGTCTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTAAAAACATTATAGCAGACAA  >  CP000730/720439‑720718                                                                                                                                            |                                                                                                                                             cAGGCATGTCGTCTATTTATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATgg                                                                                                                                             <  2:743081/141‑1 (MQ=255)   ggCATGTCGTCTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGa                                                                                                                                           >  2:628611/1‑141 (MQ=255)    gCATGTCGTCTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGaa                                                                                                                                          <  2:7566/141‑1 (MQ=255)       tGTCGTCTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATg                                                                                                                                       >  2:204738/1‑141 (MQ=255)        gtcgtcTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGa                                                                                                                                      >  1:634890/1‑141 (MQ=255)          cgtcTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAat                                                                                                                                    <  2:174512/141‑1 (MQ=255)               aTTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAAtattat                                                                                                                               >  1:58544/1‑141 (MQ=255)                 tGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTg                                                                                                                             <  1:107863/141‑1 (MQ=255)                    tataGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTAc                                                                                                                          >  2:99416/1‑141 (MQ=255)                    tataGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTAc                                                                                                                          >  2:645466/1‑141 (MQ=255)                    tataGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTAc                                                                                                                          >  2:507734/1‑141 (MQ=255)                    cataGGTAAGAAGAATGGAATTTTTTATTATTGATATAAAGGCATTTAACGCCAATTCAACATACCGAAAATGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAATTGATTATTATTGTAc                                                                                                                          >  2:552571/2‑141 (MQ=255)                      taGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACat                                                                                                                        <  1:143346/141‑1 (MQ=255)                       aGGTGAGATGCTTGGTCTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTACCGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCAAATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACatc                                                                                                                       <  2:559106/141‑2 (MQ=255)                        ggTGAGATGCTTGGACTTTTTTCTTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGCAAATGAATCTTATTGTACatat                                                                                                                      >  2:770794/1‑141 (MQ=255)                           gagaTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGAc                                                                                                                   >  2:742143/1‑141 (MQ=255)                            agaTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACa                                                                                                                  >  2:432824/1‑141 (MQ=255)                            agaTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACa                                                                                                                  >  1:183982/1‑141 (MQ=255)                            agaTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACa                                                                                                                  <  1:146959/141‑1 (MQ=255)                            agaTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACa                                                                                                                  <  1:147042/141‑1 (MQ=255)                              aTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGt                                                                                                                <  1:23346/141‑1 (MQ=255)                              aTGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGt                                                                                                                >  2:57885/1‑141 (MQ=255)                                gCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTaa                                                                                                              >  1:638012/1‑141 (MQ=255)                                 cTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAg                                                                                                             <  1:557953/141‑1 (MQ=255)                                       cTTTTTTATTATTGATATAAATGTATTTAAATATTTTTTTTTTTTTTTATTTTTAAGTATTTTATATTTCTATTGCACATGTTTATATACTTGTCTTTTTTGGGAAATGAATATTTTTTTACATATGACAGTAAGGATTAg                                                                                                       >  2:102542/1‑141 (MQ=255)                                         tttttATTATTGATATAACGGTATTTAAATATTTTTCAAGTTACCGCAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATAATTGTAAATCTGActacacgccctaagt                                                                                                     >  2:509146/1‑127 (MQ=255)                                         tttttATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCCAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGt                                                                                                     <  1:589442/141‑1 (MQ=255)                                         tttttATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGt                                                                                                     >  2:66426/1‑141 (MQ=255)                                          ttttATTATTGATATAAAGGTATTTAAATATTGTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCATATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGtt                                                                                                    >  1:275753/1‑140 (MQ=255)                                           tttATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTAc                                                                                                   >  1:482331/1‑141 (MQ=255)                                              attattGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCATTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACCAGGTACAGt                                                                                                >  2:598744/1‑141 (MQ=255)                                                tattGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTACTACACGTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCa                                                                                              <  1:470200/141‑1 (MQ=255)                                                 attGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCAt                                                                                             >  1:530969/1‑141 (MQ=255)                                                 attGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCAt                                                                                             >  1:521533/1‑141 (MQ=255)                                                 attGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCAt                                                                                             >  1:656991/1‑141 (MQ=255)                                                   tGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAg                                                                                           >  1:562313/1‑141 (MQ=255)                                                          aaGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTGCATGCATAGTACTTCg                                                                                    >  1:633036/1‑141 (MQ=255)                                                            ggTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAg                                                                                  >  1:659684/1‑141 (MQ=255)                                                              tATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCa                                                                                >  1:475507/1‑141 (MQ=255)                                                               aTTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCaa                                                                               >  1:667469/1‑141 (MQ=255)                                                                tttAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCaaa                                                                              <  2:435030/141‑1 (MQ=255)                                                                   aaaTATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtt                                                                           <  1:447177/141‑1 (MQ=255)                                                                   aaaTATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtt                                                                           >  2:723393/1‑141 (MQ=255)                                                                   aaaTATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtt                                                                           <  1:446978/141‑1 (MQ=255)                                                                    aaTATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAttt                                                                          <  2:90920/141‑1 (MQ=255)                                                                       atTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtttgtt                                                                       <  1:312248/141‑1 (MQ=255)                                                                        tttttAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtttgttt                                                                      <  1:737279/141‑1 (MQ=255)                                                                           ttAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtttgttttgt                                                                   <  1:452348/141‑1 (MQ=255)                                                                           ttAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAAtttgttttgt                                                                   <  1:38152/141‑1 (MQ=255)                                                                             aaaGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGtta                                                                 >  1:77011/1‑141 (MQ=255)                                                                              aaGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGttat                                                                <  1:78065/141‑1 (MQ=255)                                                                               aGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGttatt                                                               <  1:435731/141‑1 (MQ=255)                                                                                gTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAAAGCAAATTCTTGAAACAACGAACGTAAGGACAGAGAACAGTCAGCGTACTCCGAGAAAAATTTGTTTTGttatta                                                              >  1:703920/1‑141 (MQ=255)                                                                                       aaaTTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAaacaa                                                       <  2:474447/141‑1 (MQ=255)                                                                                         aTTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAacaaca                                                     >  1:624440/1‑141 (MQ=255)                                                                                         aTTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTGTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAacaaca                                                     >  1:10059/1‑141 (MQ=255)                                                                                            gAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACaa                                                  <  2:58544/141‑1 (MQ=255)                                                                                             aaGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACaaa                                                 >  1:14514/1‑141 (MQ=255)                                                                                             aaGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACaaa                                                 <  2:419587/141‑1 (MQ=255)                                                                                              aGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAg                                                >  2:134181/1‑141 (MQ=255)                                                                                              aGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAg                                                >  2:732205/1‑141 (MQ=255)                                                                                              aGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAg                                                >  2:134301/1‑141 (MQ=255)                                                                                              aGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAg                                                >  2:258933/1‑141 (MQ=255)                                                                                                      AAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAAc                                        >  1:287285‑M1/1‑141 (MQ=255)                                                                                                      AAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAAc                                        <  1:386363‑M1/141‑1 (MQ=255)                                                                                                       AAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACt                                       <  1:603217‑M1/141‑1 (MQ=255)                                                                                                       AAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACt                                       >  2:91483‑M1/1‑141 (MQ=255)                                                                                                       AAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACt                                       <  1:229237‑M1/141‑1 (MQ=255)                                                                                                        AAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACtt                                      >  1:395098‑M1/1‑141 (MQ=255)                                                                                                         aaCCAGGGGCACATGGTAATAGACTTGGCTTGTATGGGAAGTGAATATTATTGTACATATGACAGTGAGGACTAGGTACAGTCATAGTTCTTCGAGGAAAATTTGGTTTGTTAGTATACACAACACAAAGGAGATAACTtc                                     <  2:575421/141‑1 (MQ=255)                                                                                                         AACCAAGTGCACAGGGTAATACACTTGGCTTTTATGGAAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTTTTTTGTTATTATAAACAACACAAAGGAGATAACTTc                                     >  1:452720‑M1/1‑141 (MQ=255)                                                                                                          aCCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTtct                                    >  1:711728/1‑141 (MQ=255)                                                                                                           ccaagtgtattaccatgtgcacgtggtttttatGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTtctc                                   >  2:555234‑M2/34‑141 (MQ=255)                                                                                                            caagtgtattaccatgtgcacttggtttttatGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTctct                                  >  1:78610‑M2/33‑141 (MQ=255)                                                                                                               gTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTAtt                               >  1:7823/1‑141 (MQ=255)                                                                                                                 gtattaccatgtgcacttggtttttatGGGAAATGAATATTATTGTACa                                                                                                                         >  2:650769‑M2/28‑49 (MQ=255)                                                                                                                 gtattaccatgtgcacttggtttttatGGGAAATGAATATTATTGTACa                                                                                                                         <  1:650769‑M2/22‑1 (MQ=255)                                                                                                                    caTGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTgaaga                          >  2:524514/1‑141 (MQ=255)                                                                                                                         tAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTa                     <  1:5090/141‑1 (MQ=255)                                                                                                                           aTACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTaaa                   >  1:337007/1‑141 (MQ=255)                                                                                                                           aTACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTaaa                   <  1:219056/141‑1 (MQ=255)                                                                                                                            tACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTaaaa                  <  2:528514/141‑1 (MQ=255)                                                                                                                              cacTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTAAAAAc                >  2:372329/1‑141 (MQ=255)                                                                                                                                cTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTAAAAACAt              <  1:51383/141‑1 (MQ=255)                                                                                                                                            gggAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTAAAAACATTATAGCAGACaa  <  2:296568/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             CAGGCATGTCGTCTATTGATATAGGTGAGATGCTTGGACTTTTTTATTATTGATATAAAGGTATTTAAATATTTTTAAAGTTACCGAAATTGAAGCATTATAAAAACCAAGTGCACATGGTAATACACTTGGCTTTTATGGGAAATGAATATTATTGTACATATGACAGTAAGGACTAGGTACAGTCATAGTACTTCGAGCAAAATTTGTTTTGTTATTATAAACAACACAAAGGAGATAACTTCTCTATTGAAGAAGTTAAAAACATTATAGCAGACAA  >  CP000730/720439‑720718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.