New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	917316 =	67 (1.030)	3 (0.050)	4/236	NT	5.2%	intergenic (+75/‑115)	sufB/USA300HOU_0876	ABC superfamily ATP binding cassette transporter, membrane protein/hypothetical protein
	?	CP000730	917342 =	48 (0.800)					intergenic (+101/‑89)	sufB/USA300HOU_0876	ABC superfamily ATP binding cassette transporter, membrane protein/hypothetical protein

CGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGATTGTGGCATTAGA  >  CP000730/917203‑917478                                                                                                                                            |                                                                                                                                         cgattAATCCAGTACGAAATGGCAGGCCGTACCGGATAACACCAAACCGAGTCGTTAAGCCATTCTTGACTTCCGCAAATGGCTATTGATACCATTTTGATACTGAATATCACACACAGCCACCTCAACCTGGNttttttt                                                                                                                                         >  2:587638/4‑141 (MQ=255) cGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGTCttttttt                                                                                                                                         >  2:670256/1‑141 (MQ=255)  gTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTg                                                                                                                                        >  2:21713/1‑141 (MQ=255)       aTCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTta                                                                                                                                   >  2:122908/1‑141 (MQ=255)          aaGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATaa                                                                                                                                <  2:37854/141‑1 (MQ=255)          aaGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATaa                                                                                                                                >  2:604649/1‑141 (MQ=255)           aGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAAc                                                                                                                               <  2:495743/141‑1 (MQ=255)           aGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAAc                                                                                                                               >  1:441303/1‑141 (MQ=255)           aGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAAc                                                                                                                               <  1:599467/141‑1 (MQ=255)                gAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAAt                                                                                                                          <  1:400073/141‑1 (MQ=255)                 aaaTGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATc                                                                                                                         >  1:313785/1‑141 (MQ=255)                 aaaTGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATc                                                                                                                         <  1:345645/141‑1 (MQ=255)                      gacggTAGTATTGGATAGCTTTAAACCGCGCTGTTAAGCAATTCTTGACTTCCGAAAATGGCTATTGATACCATTATGATACTGAATATAAAAAAAAGCAACATTACTGTGGCTTTTTTTGTTTTATAACTAAATTGGCtt                                                                                                                    >  2:100148/4‑141 (MQ=255)                          gtagtaTTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTgata                                                                                                                >  2:80857/1‑141 (MQ=255)                                   gATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCtt                                                                                                       <  1:413553/141‑1 (MQ=255)                                        cTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTAc                                                                                                  <  1:179110/141‑1 (MQ=255)                                        cTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTAc                                                                                                  >  1:142140/1‑141 (MQ=255)                                        cTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTAc                                                                                                  >  1:568043/1‑141 (MQ=255)                                         ttcaaaCCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACt                                                                                                 <  2:215850/138‑1 (MQ=255)                                            aaaCCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGTTTTGTACttat                                                                                              >  2:319920/1‑141 (MQ=255)                                             aaCCGCGTTGTTAAGCCATTCTTGACTTCCGAAAAAGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGTATTGATAGATACGCTTTGTACttatt                                                                                             >  2:84492/1‑141 (MQ=255)                                                 gcgTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTtata                                                                                         >  1:557440/1‑141 (MQ=255)                                                  cgTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTatat                                                                                        >  2:185112/1‑141 (MQ=255)                                                  cgTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTatat                                                                                        >  1:168335/1‑141 (MQ=255)                                                   aaaatcgaactgatataaataagtacaaagcttgtctatcaatccgatttagttataaaacaaAAAAAGCCACAGTAATGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATc                                                                                       <  1:408888‑M1/78‑1 (MQ=255)                                                      gttAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACtta                                                                                               <  2:426320/130‑1 (MQ=255)                                                      gttAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACtta                                                                                               >  1:426320/1‑130 (MQ=255)                                                      gttAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGt                                                                                    <  1:418441/141‑1 (MQ=255)                                                      gttAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGt                                                                                    >  2:121967/1‑141 (MQ=255)                                                       ttAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGtt                                                                                   <  2:374980/141‑1 (MQ=255)                                                        cgaactgatataaataagtacaaagcttatctatcaatccgatttagttataaaacaaAAAAAGCCACAGTAATGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAgttt                                                                                  <  2:497105‑M1/83‑2 (MQ=255)                                                         aaactgatataaataagtacaaagcttatctatcaatccgatttagttataaaacaaaaaaagccacattactgtggctttttTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCg                                                                                 <  2:497105‑M2/58‑1 (MQ=255)                                                         aaGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCg                                                                                 >  1:414722/1‑141 (MQ=255)                                                           gCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGAt                                                                               >  1:497356/1‑141 (MQ=255)                                                              gatataaataagtacaaagcttatctatcaatccgatttagttataaaacaaaaaaagccacattactgtggctttttTTGTTTTATAACTAAATCGGATTGATAGACAAGCTTTGTACTTATTTATATCAGTTCGAtttt                                                                            <  1:408888‑M2/63‑1 (MQ=255)                                                                tttcggaagtcaagaaTGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGAtttttt                                                                          >  2:347277/15‑141 (MQ=255)                                                                tCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGAtttttt                                                                          >  2:379935/1‑141 (MQ=255)                                                                tCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGAtttttt                                                                          >  2:379885/1‑141 (MQ=255)                                                                  ttGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAACCTTTGTACTTATTTATATCAGTTCGATTTTTTGa                                                                        >  1:728730/1‑141 (MQ=255)                                                                   tGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGAt                                                                       >  1:308867/1‑141 (MQ=255)                                                                             aaaTGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTaaga                                                             >  2:611373/1‑139 (MQ=255)                                                                              aaTGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTTTTGTataaa                                                            >  2:362212/1‑141 (MQ=255)                                                                                tGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAaat                                                          >  2:143601/1‑141 (MQ=255)                                                                                  gCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAaataa                                                        >  1:321178/1‑141 (MQ=255)                                                                                    tATTGATACCATTGTGATACTGAATATAACAAAAAGCCACATTACTGTGTCTGTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCGGGTCTATTATTTGAGTGGTGTAagaaagaagc                                                      >  2:75018/1‑139 (MQ=255)                                                                                      caatagccATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCAt                                                    >  2:777496/7‑141 (MQ=255)                                                                                       tGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGNTTTTTTGATTGGNGTAAAAAATAATCAtt                                                   <  1:627545/141‑1 (MQ=255)                                                                                        gATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTg                                                  <  2:70773/141‑1 (MQ=255)                                                                                            ccATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGAtgg                                              <  2:55333/141‑1 (MQ=255)                                                                                                  tGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATa                                        >  1:47516/1‑141 (MQ=255)                                                                                                      aCTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGc                                    <  2:357877/141‑1 (MQ=255)                                                                                                        tGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGa                                  <  1:602343/141‑1 (MQ=255)                                                                                                           atatAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGacaa                               >  1:110365/1‑141 (MQ=255)                                                                                                               aaCAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAAcaca                           <  2:424020/141‑1 (MQ=255)                                                                                                                aCAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACaa                          >  2:463724/1‑141 (MQ=255)                                                                                                                 cAAAAAGCCACATTACGGTGGCTTTTTTTGTTTTATAACTAAATCGGATAGATACATCAGCTTTGTTCTTATTTATATCAGTTCGATTATTTGTTTGTTGTAAATAATAATCATTGATGGTGGATagagcgtcaaaaccaa                         <  2:667081‑M1/140‑7 (MQ=255)                                                                                                                  AAAAAGCCACAGTAATGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAAt                        >  2:408888‑M1/1‑141 (MQ=255)                                                                                                                     AAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACAAAAATaca                     <  2:57521‑M1/141‑1 (MQ=255)                                                                                                                       GCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATacaac                   <  2:715653‑M1/141‑1 (MQ=255)                                                                                                                       GCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGAGTAAAAAATAATCATTTATGGTGGATAAAGCGACAACACAAATacaac                   <  2:91852‑M1/141‑1 (MQ=255)                                                                                                                        CCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATacaaca                  >  1:157085‑M1/1‑141 (MQ=255)                                                                                                                          acagtaatgtggctttttTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATg                >  1:530946‑M2/19‑141 (MQ=255)                                                                                                                           CATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGa               <  1:24820‑M1/141‑1 (MQ=255)                                                                                                                             ttACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGAtt             <  1:389532/141‑1 (MQ=255)                                                                                                                             ttACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATGTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGAtt             >  1:75764/1‑141 (MQ=255)                                                                                                                               aCTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGATtgt           <  1:236840/141‑1 (MQ=255)                                                                                                                                    ggctttttTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGATTGTGGCAt      <  1:186052‑M2/133‑1 (MQ=255)                                                                                                                                    ggCTTTTTTTTTTTTATATCTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTTTTTTTTAAAATAATCAGTGATGGTGGCTTATTTGACTACACAAATACAACATGATNGTGGCAt      >  2:588888/1‑141 (MQ=255)                                                                                                                                        ttttTTGTTTTATAACTAAATCGGATTGATAGATAAGGTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGATTGTGGCATTaga  <  1:319920‑M2/137‑1 (MQ=255)                                                                                                                                            |                                                                                                                                         CGTTTAATCAAGTTCGAAATGGAAGGTAGTATTGGATAGCTTTAAACCGCGTTGTTAAGCCATTCTTGACTTCCGAAAATGGCTATTGATACCATTTTGATACTGAATATAACAAAAAGCCACATTACTGTGGCTTTTTTTGTTTTATAACTAAATCGGATTGATAGATAAGCTTTGTACTTATTTATATCAGTTCGATTTTTTGATTGGTGTAAAAAATAATCATTGATGGTGGATAAAGCGACAACACAAATACAACATGATTGTGGCATTAGA  >  CP000730/917203‑917478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.