New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 920390	46 (0.710)	3 (0.050)	3/230	NT	5.9%	coding (39/135 nt)	USA300HOU_0880	hypothetical protein
	?	CP000730	= 920428	55 (0.950)					coding (1/135 nt)	USA300HOU_0880	hypothetical protein

GCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATG  >  CP000730/920290‑920568                                                                                                                                           |                                                                                                                                             gcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCATATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATtt                                                                                                                                            >  1:624379‑M2/1‑139 (MQ=255) gcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATtt                                                                                                                                            <  2:777511‑M2/141‑3 (MQ=255)     cTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgt                                                                                                                                        <  2:730205‑M2/141‑7 (MQ=255)       aGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtgg                                                                                                                                      >  2:238171‑M2/1‑133 (MQ=255)       aGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtgg                                                                                                                                      >  1:684708‑M2/1‑133 (MQ=255)        gCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCTATttttgtgga                                                                                                                                     <  2:695748‑M2/141‑10 (MQ=255)        gCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTATAGTGCTTGCCATttttgtgga                                                                                                                                     <  2:778885‑M2/141‑10 (MQ=255)             aacGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcg                                                                                                                                >  2:612295‑M2/1‑127 (MQ=255)                gCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAACGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGttt                                                                                                                             <  2:665510/141‑1 (MQ=255)                 cATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc                                                                                                                            <  1:372437/141‑1 (MQ=255)                  aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                                                                           >  1:349972/1‑141 (MQ=255)                  aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                                                                           >  1:341680/1‑141 (MQ=255)                   tCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTa                                                                                                                          >  1:321060/1‑141 (MQ=255)                    cccGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt                                                                                                                         >  1:16701/1‑141 (MQ=255)                        ccAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa                                                                                                                     <  1:575231/141‑1 (MQ=255)                           acacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAAGAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATCGTTTTAGTACTTGCCATTTTTGTCGATTGCGTTTCTATTGTACCa                                                                                                                  >  2:393606/1‑141 (MQ=255)                            cacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCaa                                                                                                                 <  1:606063/141‑1 (MQ=255)                             acCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                                                                <  1:692566/141‑1 (MQ=255)                             acCATCATGTCCAATATAATCAATCAAATTAATCAAACCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                                                                <  1:24421/141‑1 (MQ=255)                             acCAGCATGTCCAATAGAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAGGCACAGGCGCCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                                                                <  2:510132/141‑1 (MQ=255)                               catcatGTCCAATATAATCAATCAAATTCATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATATTTGTGGATTGTGTTTCTATTTTACCAAttt                                                                                                              >  2:263483/1‑141 (MQ=255)                                   atGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATc                                                                                                          >  2:491071/1‑141 (MQ=255)                                    tGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATcc                                                                                                         >  2:117563/1‑140 (MQ=255)                                     gTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAt                                                                                                                                              >  2:418758/1‑103 (MQ=255)                                     gTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAt                                                                                                                                              <  1:418758/103‑1 (MQ=255)                                      tCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATctttgtggactgcggtcgattatttatattgcatgattt                                                                                                       <  2:572975‑M2/141‑40 (MQ=255)                                      tCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaaa                                                                                                       >  2:515700/1‑141 (MQ=255)                                         aaTATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGa                                                                                                    >  1:773551/1‑141 (MQ=255)                                              aatcaatcAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACa                                                                                               <  1:539644/141‑1 (MQ=255)                                                 cactcacATTACTGAAATCATGCAATATAAATAATCGACCGCAATCCACACAACCACAAGCACCCCCAAACACTAGTCAAGTGCTTGCCATTGTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa                                                                                            >  2:111379/4‑141 (MQ=255)                                                        aTTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATATAATCAAACGAAAACATCAAGCTGaa                                                                                     >  1:737853/1‑141 (MQ=255)                                                         ttAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAg                                                                                    >  2:297412/1‑141 (MQ=255)                                                           aatcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt                                                                                  >  2:237478/1‑141 (MQ=255)                                                             tcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg                                                                                >  1:236003/1‑141 (MQ=255)                                                              caaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc                                                                               >  2:243269/1‑141 (MQ=255)                                                                aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCg                                                                             <  2:628303/141‑1 (MQ=255)                                                                  tcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa                                                                           <  1:40629/141‑1 (MQ=255)                                                                     tGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa                                                                        >  1:607703/1‑141 (MQ=255)                                                                     tGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa                                                                        >  2:73900/1‑141 (MQ=255)                                                                        aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt                                                                     >  1:110777/1‑141 (MQ=255)                                                                              aataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCa                                                               >  1:643612/1‑141 (MQ=255)                                                                                    cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa                                                         <  2:23788/141‑1 (MQ=255)                                                                                    cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa                                                         >  1:88945/1‑141 (MQ=255)                                                                                    cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATAAAGaaaa                                                         <  2:384046/141‑1 (MQ=255)                                                                                     gACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaa                                                        >  1:559711/1‑141 (MQ=255)                                                                                          cAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc                                                   >  1:626448/1‑141 (MQ=255)                                                                                             tCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCaaa                                                <  2:485224/141‑1 (MQ=255)                                                                                                 caAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTTTTTTTTTTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaa                                            >  2:350758/1‑141 (MQ=255)                                                                                                   aaaGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgctagtcg                                          <  1:123567‑M2/141‑101 (MQ=255)                                                                                                    aagcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgctagtcgc                                         <  2:729334‑M2/141‑102 (MQ=255)                                                                                                        acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGc                                     <  1:59191/141‑1 (MQ=255)                                                                                                        acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGc                                     >  1:525737/1‑141 (MQ=255)                                                                                                        acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGc                                     >  2:173358/1‑141 (MQ=255)                                                                                                         caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGCAAACATCACGCTGAAGATCGCCGCAAGCTTTTAATCAAGCAAAAAAATCAAACTAAAGTTCGCt                                    >  1:625730/1‑141 (MQ=255)                                                                                                         caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGGTCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCt                                    >  1:353450/1‑141 (MQ=255)                                                                                                         caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGcc                                    >  2:682063/1‑140 (MQ=255)                                                                                                           agcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGa                                  <  1:262296/141‑1 (MQ=255)                                                                                                           agcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTATCTATTTTACAAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAAAATAAAACTCCAGTTCGCTGa                                  >  2:466594/1‑141 (MQ=255)                                                                                                            gcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGaa                                 <  1:559874/141‑1 (MQ=255)                                                                                                             cacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGaaa                                <  2:265623/141‑1 (MQ=255)                                                                                                             cacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCAGAACGATTTTACTCAAGCAAAAACATCAAACTAAAGTTCGCTGaaa                                >  1:28782/1‑141 (MQ=255)                                                                                                                 cccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGAt                            >  1:259794/1‑141 (MQ=255)                                                                                                                   cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTa                          <  2:110777/141‑1 (MQ=255)                                                                                                                        attattTTAGTGCTTGCCATTTTTGTGGATTGCTTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATa                     <  1:703514/141‑1 (MQ=255)                                                                                                                         ttattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATaa                    <  2:728375/141‑1 (MQ=255)                                                                                                                          tattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATaaa                   >  1:553409/1‑141 (MQ=255)                                                                                                                                 ttGCTTGCCATTTGTGTTGATTGCGTTTCCATTTTACCAATATAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAATAAAAAAAAAAAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTtata            <  2:560344/140‑1 (MQ=255)                                                                                                                                 gTGCTTGCCATTTTTTTTTTTTTCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTtata            >  2:240170/1‑141 (MQ=255)                                                                                                                                 gTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGTAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTtata            <  1:553553/141‑1 (MQ=255)                                                                                                                                  tGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTatat           >  1:67278/1‑141 (MQ=255)                                                                                                                                    cTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATgg         >  2:513479/1‑141 (MQ=255)                                                                                                                                     ttGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGt        <  1:777511/141‑1 (MQ=255)                                                                                                                                         cATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatga    <  1:13388/141‑1 (MQ=255)                                                                                                                                          aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatgat   <  1:38600/141‑1 (MQ=255)                                                                                                                                          aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatgat   <  1:38606/141‑1 (MQ=255)                                                                                                                                           tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTatgatg  <  2:423382/141‑1 (MQ=255)                                                                                                                                           |                                                                                                                                             GCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGCTGAAATGATTATGATAAAAGTTATATGGTATGATG  >  CP000730/920290‑920568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.