New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 940821	60 (0.920)	3 (0.050)	3/246	NT	5.1%	intergenic (+2/+54)	comA/USA300HOU_0905	hypothetical protein/hypothetical protein
	?	CP000730	= 940872	55 (0.880)					intergenic (+53/+3)	comA/USA300HOU_0905	hypothetical protein/hypothetical protein

ACATGTATGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATCCTGCGACA  >  CP000730/940732‑940995                                                                                                                                             |                                                                                                                            acaTGTATGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGttt                                                                                                                             >  1:548955/1‑141 (MQ=255)  cATGTATGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTt                                                                                                                            <  2:386819‑M2/141‑2 (MQ=255)     gTATGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTtttt                                                                                                                         <  2:157113‑M2/141‑5 (MQ=255)     gTATGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTtttt                                                                                                                         >  2:327725‑M2/1‑137 (MQ=255)        tGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATg                                                                                                                      >  1:237501/1‑141 (MQ=255)         gggATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATgc                                                                                                                     <  1:680292/141‑1 (MQ=255)           gATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATgcgc                                                                                                                   <  2:155494/141‑1 (MQ=255)               taAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCtata                                                                                                               >  1:428143/1‑141 (MQ=255)                     ttAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATAttgttg                                                                                                         <  2:126545/141‑1 (MQ=255)                       aaGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTa                                                                                                       >  1:613000/1‑141 (MQ=255)                         gAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGt                                                                                                     <  1:782983/141‑1 (MQ=255)                         gAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGt                                                                                                     <  1:98619/141‑1 (MQ=255)                          aaTGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGtt                                                                                                    <  2:304813/141‑1 (MQ=255)                           aTGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGttt                                                                                                   >  1:480929/1‑141 (MQ=255)                                   gAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATg                                                                                           >  1:757668/1‑141 (MQ=255)                                    aaCAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGc                                                                                          <  1:610533/141‑1 (MQ=255)                                      cAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCtt                                                                                        <  1:571438/141‑1 (MQ=255)                                       aattaattACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTg                                                                                       >  1:759778/1‑141 (MQ=255)                                            attaCAGTTATGTGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCaa                                                                                  <  2:361639/141‑1 (MQ=255)                                                cAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTCGTAGTTTTAGAAATGCTTGTTCAATGCg                                                                              >  1:56045/1‑141 (MQ=255)                                                 aGTTATGCGTGGTGCAGTTGCAATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTAATGAGATATTCATAACTACGGCTAGTAGTTTTTTTATGCGCTATATTATTGGAGTTTTGGAAATGAGTGTTCTATGCGt                                                                             >  2:86475/1‑141 (MQ=255)                                                  gTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGtt                                                                            <  1:609555/141‑1 (MQ=255)                                                          tGGTACAGTTGCTCTTAAACCTTTAAAATAAAAGAACTGCTAGCTGAACTGATCTGCGCTCTTCATCACTACGGCTACCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCt                                                                    <  1:74765/141‑1 (MQ=255)                                                          tGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCt                                                                    <  2:655684/141‑1 (MQ=255)                                                          tGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCt                                                                    <  2:494768/141‑1 (MQ=255)                                                           ggTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCtt                                                                   <  1:170569/141‑1 (MQ=255)                                                            gTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCGGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCttt                                                                  >  1:676825/1‑141 (MQ=255)                                                             tACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTa                                                                 <  2:546681/141‑1 (MQ=255)                                                                  ttGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGcc                                                            >  2:552697/1‑141 (MQ=255)                                                                  ttGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGAcc                                                            >  1:63930/1‑141 (MQ=255)                                                                       aTTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCa                                                       >  1:68382/1‑141 (MQ=255)                                                                               tttAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACAttt                                               >  2:479048/1‑141 (MQ=255)                                                                                 taaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCATTGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                                             >  2:534648/1‑141 (MQ=255)                                                                                 taaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTTCGGCCACCCATAACATTTCt                                             >  2:241658/1‑141 (MQ=255)                                                                                 taaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                                             <  1:434451/141‑1 (MQ=255)                                                                                 taaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                                             <  1:434463/141‑1 (MQ=255)                                                                                 taaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                                             >  1:246144/1‑141 (MQ=255)                                                                                 taaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTGTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                                             >  1:93990/1‑141 (MQ=255)                                                                                    aataaaataaCGGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTGGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTAcc                                          <  2:266809/141‑1 (MQ=255)                                                                                    aataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGTGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTAcc                                          >  2:217344/1‑141 (MQ=255)                                                                                    aataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTAcc                                          <  1:232965/141‑1 (MQ=255)                                                                                       aaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCaaa                                       <  1:370931/141‑1 (MQ=255)                                                                                        aaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAAt                                      >  2:11140/1‑141 (MQ=255)                                                                                        aaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAAt                                      >  1:275184/1‑141 (MQ=255)                                                                                        aaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAAt                                      >  1:551517/1‑141 (MQ=255)                                                                                            aaCTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTc                                  >  1:89854/1‑141 (MQ=255)                                                                                               tGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTa                               <  1:346502/141‑1 (MQ=255)                                                                                                  tAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTttttattttaaaggtttaatagcaactgtaccacgcataactgtaattaattgttctttgtcattcttaatttttatatcccatacatgtgtcgact                            <  2:131775‑M2/141‑98 (MQ=255)                                                                                                  tAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGtgccttaa                            >  1:121699/1‑134 (MQ=255)                                                                                                  tAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAAtt                            >  1:404334/1‑141 (MQ=255)                                                                                                      tGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTttttattttaaaggtttaatagcaactgtaccacgcataactgtaattaattgttctttgtcattcttaatttttatatcccatacatgtgtcgacttacc                        <  1:95171‑M2/141‑102 (MQ=255)                                                                                                      tGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCCACCTAATGGTCCTAATTCTaa                        <  2:396493/141‑1 (MQ=255)                                                                                                       gAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATTTTTTTTATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAg                       >  2:255962/1‑141 (MQ=255)                                                                                                          aTGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACGCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCt                    >  1:7093/1‑141 (MQ=255)                                                                                                             ttATGAGATATTCATAACTACGGCTAGCAGTTTttttattttaaaggtttaatagcaactgtaccacgcataactgtaattaattgttctttgtcattcttaatttttatatcccatacatgtgtcgacttacctcgatga                 <  2:757704‑M2/141‑109 (MQ=255)                                                                                                               aTGAGATATTCATAACTACGGCTAGCAGTTTTTTTCTGCGTTGTATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCaca               >  2:30443/1‑139 (MQ=255)                                                                                                                tGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAg              >  2:289618/1‑141 (MQ=255)                                                                                                                tGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAg              >  2:716946/1‑141 (MQ=255)                                                                                                                  agaTATTCATAACTACGGCTAGCAGTTGTTTTAGGCGTCATATTGGTTTATGTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCa            <  1:350579/141‑1 (MQ=255)                                                                                                                   gaTATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCAt           >  1:439338/1‑141 (MQ=255)                                                                                                                    atatTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATc          <  2:20100/141‑1 (MQ=255)                                                                                                                        tCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATCCTGc      >  1:316380/1‑141 (MQ=255)                                                                                                                         cATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATCCTGCg     >  2:454587/1‑141 (MQ=255)                                                                                                                           tAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATCCTGCGAc   <  2:414894/141‑1 (MQ=255)                                                                                                                            aaCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATCCTGCGACa  <  2:757668/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                            ACATGTATGGGATATAAAAATTAAGAATGACAAAGAACAATTAATTACAGTTATGCGTGGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATTCTAAGTCTGCAAAGCATCCTGCGACA  >  CP000730/940732‑940995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.