New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1732970	53 (0.810)	4 (0.070)	4/234	NT	7.3%	intergenic (+156/+81)	yvbT/USA300HOU_1624	dehydrogenase/hypothetical protein
	?	CP000730	= 1733003	53 (0.900)					intergenic (+189/+48)	yvbT/USA300HOU_1624	dehydrogenase/hypothetical protein

CAGTAACAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTACATTTTTAACTTG  >  CP000730/1732868‑1733137                                                                                                                                        |                                                                                                                                       cAGTAACAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggc                                                                                                                                   <  1:10090‑M2/141‑6 (MQ=255) cAGTAACAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggc                                                                                                                                   <  1:325097‑M2/141‑6 (MQ=255)  aGTAACAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggcg                                                                                                                                  >  2:353247‑M2/1‑135 (MQ=255)   gTAACAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggcgc                                                                                                                                 <  2:499181‑M2/141‑8 (MQ=255)     aaCAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGAAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTCACCAGTGTAAGTGTTTATTTGATggggcgctt                                                                                                                               <  1:92665‑M2/141‑10 (MQ=255)        aGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggcgctttca                                                                                                                            <  1:597100‑M2/141‑13 (MQ=255)          cATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCaaa                                                                                                                          >  2:168594/1‑141 (MQ=255)               tgaatgaaAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATAtt                                                                                                                     <  1:234780/141‑1 (MQ=255)                gaatgaaAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTg                                                                                                                    >  2:443469/1‑141 (MQ=255)                 aatgaaAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGa                                                                                                                   >  2:130970/1‑141 (MQ=255)                  atgaaAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGaa                                                                                                                  >  2:46744/1‑141 (MQ=255)                           gTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGTGCGCTTTCAAAATATTGAAAAGCATATc                                                                                                         <  2:556805/141‑1 (MQ=255)                                  ttGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAAtt                                                                                                  >  1:718603/1‑141 (MQ=255)                                       cAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAg                                                                                             >  1:180326/1‑141 (MQ=255)                                          tCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGaaa                                                                                          <  1:46980/141‑1 (MQ=255)                                            atttatttTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAatt                                                                                        <  1:491379/141‑1 (MQ=255)                                            atttatttTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGATTACAAAATATTGAAAAGCATATCCAAAATTTAAAGAAatt                                                                                        <  2:553207/141‑1 (MQ=255)                                             tttatttTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAattt                                                                                       <  2:763637/141‑1 (MQ=255)                                              ttatttTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAattta                                                                                      <  1:572487/141‑1 (MQ=255)                                                atttTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAatttatt                                                                                    >  2:115748/1‑141 (MQ=255)                                                 ttttAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAatttattt                                                                                   >  1:102774/1‑141 (MQ=255)                                                 ttttAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAatttattt                                                                                   >  1:644983/1‑141 (MQ=255)                                                   ttAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTtct                                                                                 <  1:670428/141‑1 (MQ=255)                                                   ttAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTtct                                                                                 >  1:404406/1‑141 (MQ=255)                                                     aGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGa                                                                                            <  2:166288/128‑1 (MQ=255)                                                     aGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGa                                                                                            >  1:166288/1‑128 (MQ=255)                                                      gTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCtt                                                                              >  2:734230/1‑141 (MQ=255)                                                          tGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTCAGCTGGTTTATTTCTCTTTATc                                                                          >  1:403495/1‑141 (MQ=255)                                                           gATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCt                                                                         >  2:275560/1‑141 (MQ=255)                                                             ttCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTTAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTc                                                                       <  1:213558/141‑1 (MQ=255)                                                             ttCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTc                                                                       <  1:302864/141‑1 (MQ=255)                                                                aaaTTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCAtt                                                                    <  2:424145/141‑1 (MQ=255)                                                                    tCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCt                                                                <  1:597279/141‑1 (MQ=255)                                                                    tCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCt                                                                <  2:307248/141‑1 (MQ=255)                                                                     cACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTCTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAATATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCtt                                                               <  2:750693/141‑1 (MQ=255)                                                                      aCTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCttt                                                              <  1:782700/141‑1 (MQ=255)                                                                       cTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCtttt                                                             >  1:713856/1‑141 (MQ=255)                                                                         tAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCtttttt                                                           <  1:2860/141‑1 (MQ=255)                                                                           aaaTTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTtct                                                         <  1:237599/141‑1 (MQ=255)                                                                              ttCTAATGCAAATATGAAAGCGCCGCTTCAACTTTACAATGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATGTATTTCTCTTTATCTTGATTTTCTTTTTTCTCtt                                                      <  2:578741/141‑1 (MQ=255)                                                                                   aTGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAACTCTTGCAAAGCATATCCAAACTTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTa                                                 <  1:115748/141‑1 (MQ=255)                                                                                   aTGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTa                                                 >  2:158374/1‑141 (MQ=255)                                                                                       aaaTATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCg                                             >  2:298979/1‑141 (MQ=255)                                                                                           atGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAAGTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATcc                                         >  1:55525/1‑141 (MQ=255)                                                                                             gAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTg                                       <  1:262763/141‑1 (MQ=255)                                                                                               aaTCGCCTCTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggcgctttcatatttgcattagaattttaagtgaatttgaatcattactaaaataaatgattgaacaataaagacatctttcattcaaaatgctgtt                                     >  2:92665‑M2/1‑42 (MQ=255)                                                                                               aaGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGtt                                     >  2:562722/1‑140 (MQ=255)                                                                                                  cgcCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTatat                                  <  2:174841/141‑1 (MQ=255)                                                                                                  cgcCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTatat                                  >  2:36950/1‑141 (MQ=255)                                                                                                     cccTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCa                               <  2:317270/141‑1 (MQ=255)                                                                                                      ccTTCAACTTTACACTGTGTAAGTGTTTATTTGATggggcgctttcatatttgcattagaattttaagtgaatttgaatcattactaaaataaatgattgaacaataaagacatctttcattcaaaatgctgttactgtat                              <  1:178922‑M2/141‑107 (MQ=255)                                                                                                      ccTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCAt                              >  2:320005/1‑141 (MQ=255)                                                                                                       cTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCAtt                             <  2:573990/141‑1 (MQ=255)                                                                                                         tCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATtta                           <  2:180326/141‑1 (MQ=255)                                                                                                            aCTTTACACTGTGTAAGTGTTTATTTGATggggcgctttcatatttgcattagaattttaagtgaatttgaatcattactaaaataaaagattgaacaataaagacatctttcattcaaaatgctgttactgtatattttt                        <  1:312863‑M2/141‑113 (MQ=255)                                                                                                            aCTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATttatct                        <  1:297626/141‑1 (MQ=255)                                                                                                              tttACACTGTGTAAGTGTTTATTTGATggggcgctttcatatttgcattagaattttaagtgaatttgaatcattactaaaataaatgattgaacaataaagacatctttcattcaaaatgctgttactgtatatttttat                      <  1:776888‑M2/141‑115 (MQ=255)                                                                                                               ttACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATttatcttat                     >  1:277499/1‑141 (MQ=255)                                                                                                                     tgtgTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATCTCCAAAATTTAAAGAAATTTATTTATCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTa               >  1:751868/1‑141 (MQ=255)                                                                                                                     tgtgTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTa               <  1:574175/141‑1 (MQ=255)                                                                                                                            gcgtTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAAATTATTTCTCTTAATCTTCATCTTCTTTTTTCTCTCCGTTATTCGATCCTGTACAATCATTGTTCTTATCTTTTACAttttt        >  2:784623/3‑141 (MQ=255)                                                                                                                              gtTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTACATTTTTaa      <  2:722955/141‑1 (MQ=255)                                                                                                                                 tATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCTTTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTACATTTTTAACtt   <  2:718603/141‑1 (MQ=255)                                                                                                                                  aTTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTACATTTTTAACTTg  <  1:145236/141‑1 (MQ=255)                                                                                                                                        |                                                                                                                                       CAGTAACAGCATTTTGAATGAAAGATGTCTTTATTGTTCAATCATTTATTTTAGTAATGATTCAAATTCACTTAAAATTCTAATGCAAATATGAAAGCGCCCCTTCAACTTTACACTGTGTAAGTGTTTATTTGATGGGGCGCTTTCAAAATATTGAAAAGCATATCCAAAATTTAAAGAAATTTATTTCTCTTTATCTTCATTTTCTTTTTTCTCTTCGTTATTCGATCCTGTATATTCATTTATCTTATCTTTTACATTTTTAACTTG  >  CP000730/1732868‑1733137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.