New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2088022 =	64 (0.980)	7 (0.120)	5/224	NT	12.1%	intergenic (+39/+1041)	chp/sak	chemotaxis inhibitory protein CHIPS/staphylokinase
	?	CP000730	2088070 =	46 (0.810)					intergenic (+87/+993)	chp/sak	chemotaxis inhibitory protein CHIPS/staphylokinase

AATCATCTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATA  >  CP000730/2087931‑2088206                                                                                                                                              |                                                                                                                                         aaTCATCTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATc                                                                                                                                         >  1:200986/1‑141 (MQ=255)   tcatcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTa                                                                                                                                       <  1:752014/141‑1 (MQ=255)    catcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTaa                                                                                                                                      >  1:145391/1‑141 (MQ=255)    catcTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTaa                                                                                                                                      >  1:145418/1‑141 (MQ=255)           tGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCaa                                                                                                                               >  2:288541/1‑141 (MQ=255)             taattaatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAAc                                                                                                                             <  2:1650/141‑1 (MQ=255)             taattaatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAAc                                                                                                                             <  2:530865/141‑1 (MQ=255)                 taatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCa                                                                                                                         <  1:44999/141‑1 (MQ=255)                  aatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCAc                                                                                                                        >  2:505629/1‑141 (MQ=255)                  aatGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCAc                                                                                                                        >  1:133765/1‑141 (MQ=255)                   atGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACt                                                                                                                       <  1:231675/141‑1 (MQ=255)                   atGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACt                                                                                                                       <  2:538817/141‑1 (MQ=255)                     ggTCCTGGAAAAACTAATGTATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTaa                                                                                                                     <  1:386909/141‑1 (MQ=255)                     ggTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTaa                                                                                                                     <  1:155527/141‑1 (MQ=255)                     ggTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTaa                                                                                                                     >  1:514781/1‑141 (MQ=255)                       tCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAAc                                                                                                                   >  1:476717/1‑141 (MQ=255)                         cTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACtt                                                                                                                 <  2:104544/141‑1 (MQ=255)                         cTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTCATATATCTAATTATCAAACTGCACTAAACtt                                                                                                                 >  2:476116/1‑141 (MQ=255)                             gaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagatatataaaggtttggcagacatttcataacttgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTAc                                                                                                               <  2:129091‑M2/28‑1 (MQ=255)                             gaggtagacaaggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagatatataaaggtttggcagacatttcataacttgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTAc                                                                                                               <  1:342117‑M2/28‑1 (MQ=255)                               aaaCTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCaaa                                                                                                           <  2:161307/141‑1 (MQ=255)                                  cTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACt                                                                                                        >  1:327399/1‑141 (MQ=255)                                    aaTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATTTTTTTTTTTGGCA‑GACATTTCATAACT‑TGCCAAACTTTTATATATCTAATTATTAAACTGCACTAAACTTACCAAAACTGc                                                                                                      >  2:549106/1‑141 (MQ=255)                                     aTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTTTTTTTTTTTTTGGCA‑GACATTTCATAACT‑TGCCAATCTTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCt                                                                                                     >  2:336573/1‑141 (MQ=38)                                     aTGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTATGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTgta                                                                                                     >  1:583203/1‑139 (MQ=255)                                      tGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCtt                                                                                                    <  1:713966/141‑1 (MQ=255)                                      tGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCtt                                                                                                    >  2:767640/1‑141 (MQ=255)                                      tGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCtt                                                                                                    <  1:258537/141‑1 (MQ=255)                                       aggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagatatataaaggtttggcagacatttcataacttgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTg                                                                                                       >  1:311174‑M2/104‑139 (MQ=255)                                       aggcaggtaatagaataagcagttttggtaagtttagtgcagtttgataattagatatataaaggtttggcagacatttcataacttgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTg                                                                                                       <  2:311174‑M2/36‑1 (MQ=255)                                        aaTATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTAt                                                                                                  <  2:773656/141‑1 (MQ=255)                                            tGCATACTAATAGTAGTCACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGACTGGCA‑GACGTTTCATAAGG‑GGCCATACCTTTAGAGATCTAATTATCAAACTGCACTAAACTTACCAAAACTTCTTATTCTa                                                                                              >  1:664590/1‑141 (MQ=37)                                             gCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTAt                                                                                             >  2:257423/1‑141 (MQ=255)                                              cATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTAtt                                                                                            <  2:102660/141‑1 (MQ=255)                                              cATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTAtt                                                                                            >  1:239909/1‑141 (MQ=255)                                                tACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTAc                                                                                          <  1:393111/141‑1 (MQ=255)                                                  cTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATGATCAAACTGCACTAAACTTACCAGAACTGCTTATTCTATTACCt                                                                                        <  2:244380/141‑1 (MQ=255)                                                    aaTAGGAGTTACATAAATTAAAAGGTAAATATTTCTTTTTTATATAAATGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTgt                                                                                      <  1:747080/141‑2 (MQ=255)                                                        gtagtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTg                                                                                  >  2:757220/1‑141 (MQ=255)                                                        cagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAAGTTATGAAATGTCT‑‑GCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCt                                                                                    >  1:311174‑M1/37‑139 (MQ=255)                                                        cagttttggtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAAGTTATGAAATGTCT‑‑GCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCt                                                                                    <  2:311174‑M1/103‑1 (MQ=255)                                                          agtTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATCTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTc                                                                                >  2:759436/1‑141 (MQ=255)                                                                gtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCAAGTTATGAAATGTCT‑‑GCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctc                                                                          <  2:129091‑M1/113‑1 (MQ=255)                                                                gtaagtttagtgcagtttgataattagaTATATAAAGGTTTGGCA‑‑AGTTATGAAATGTCTGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctc                                                                          <  1:342117‑M1/113‑1 (MQ=255)                                                                aTAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACctc                                                                          <  1:21870/141‑1 (MQ=255)                                                                    aTTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTcc                                                                       <  2:783923/140‑1 (MQ=255)                                                                    aTTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTcc                                                                       >  1:783923/1‑140 (MQ=255)                                                                     ttAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCtt                                                                     >  2:694616/1‑140 (MQ=255)                                                                         aaGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGc                                                                 >  1:696219/1‑141 (MQ=255)                                                                               gATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGTtatata                                                           <  2:535707/141‑1 (MQ=255)                                                                                      cTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGt                                                    <  1:213954/141‑1 (MQ=255)                                                                                         ttttATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGt                                                 <  2:11471/141‑1 (MQ=255)                                                                                            tagataAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAATCCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAATACTGCTTATTCTATTACCTGCCTTGTCTACATCTCCTGTCGCTATATAACGACGTTGTCCa                                              <  2:370149/138‑1 (MQ=255)                                                                                                TAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAATCCTTTATACATCTTTTTTTCAAACGACACTAAACGTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTAt                                          >  1:704019‑M1/1‑141 (MQ=255)                                                                                                  AAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTa                                        >  1:767640‑M1/1‑141 (MQ=255)                                                                                                  AAGGTTTGGCA‑GACATTTCATAACT‑TGCAAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTa                                        >  1:25636‑M1/1‑141 (MQ=255)                                                                                                      TTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCaa                                    >  1:629644‑M1/1‑141 (MQ=255)                                                                                                            A‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAg                              >  2:741832‑M1/1‑141 (MQ=255)                                                                                                            A‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAg                              >  1:126897‑M1/1‑141 (MQ=255)                                                                                                                 ttatgaaatgtctgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACTTTGTCCACTATTAGCAATATAAGTaa                           >  2:621328‑M2/30‑141 (MQ=255)                                                                                                                 ttatgaaatgtctgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTaa                           >  2:607631‑M2/30‑141 (MQ=255)                                                                                                                 aTTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAAt                          <  1:184907/141‑1 (MQ=255)                                                                                                                 aTTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAAt                          <  1:242965/141‑1 (MQ=255)                                                                                                                    tCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCa                       <  1:77770/141‑1 (MQ=255)                                                                                                                    tCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCa                       >  1:18625/1‑141 (MQ=255)                                                                                                                      aaatgtctgccaaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCGTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCAt                      >  2:416230‑M2/25‑141 (MQ=255)                                                                                                                      aTAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATc                     >  1:286980/1‑141 (MQ=255)                                                                                                                               ccaaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCa             <  1:119271‑M2/126‑1 (MQ=255)                                                                                                                                caaacctttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCAt            >  2:543518‑M2/15‑141 (MQ=255)                                                                                                                                       ttatataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCa     <  2:468292‑M2/134‑1 (MQ=255)                                                                                                                                         atataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAat   >  2:402983‑M2/6‑141 (MQ=255)                                                                                                                                          tataTCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCCATATAAGTAATCCATCTATAGCCATTAATGCAata  >  2:556773‑M2/5‑141 (MQ=255)                                                                                                                                              |                                                                                                                                         AATCATCTTATGTAATTAATGGTCCTGGAAAAACTAATGAATATGCATACTAATAGTAGTTACATAAATTAAAAGGTAGATATTTCTTTTTTATATAAAGGTTTGGCA‑GACATTTCATAACT‑TGCCAAACCTTTATATATCTAATTATCAAACTGCACTAAACTTACCAAAACTGCTTATTCTATTACCTGCCTTGTCTACCTCTCCTGTCGCTATATAACGACGTTGTCCACTATTAGCAATATAAGTAATCCATCTATAGCCATTAATGCAATA  >  CP000730/2087931‑2088206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.