New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1237052	154 (1.100)	5 (0.040)	5/562	18.1	3.2%	coding (190/1533 nt)	ycgB	SpoVR family stationary phase protein
	?	NC_000913	= 1237064	155 (1.130)					coding (178/1533 nt)	ycgB	SpoVR family stationary phase protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

CCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1236748‑1237052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACAATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTAC  <  NC_000913/1237064‑1236769                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccataacttctttcccaacCGGTAATATATTTACGGGCAAAAATCTGATCATCGCCAATCGAACTGGCGTCGGTCAAGCTACGGAATAAGTAATTGTTTTTGAATAAATAGTTATGCCCCTAGCAGGCATGAGCCATCACCAGCGCTTGCATGTTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCA                                                                                                                                                                                                                                                                                                              <  1:856326/282‑1     aacgattgtctCACTTGGTAAAGTATTTCCGGGCAAAAATCAGATAATCGAAAATCGAACTGGCGTCGGTACAGCTACGGAATAAGTTATTGTTTTTGCAGAAATAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATTGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCC                                                                                                                                                                                                                                                                                                          <  2:294392/290‑1                                   GGGCAAAAATCAAATAAGCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTATTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCTACTCCAGCGTCGGCATGCCAATTAACTAT                                                                                                                                                                                                                                                                            <  1:532376/301‑1                                                           TCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCA                                                                                                                                                                                                                                                                                                              <  2:62363/243‑1                                                                                                                                                                      TCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAG                                                                                                                                                                                                                                           <  1:363040/203‑1                                                                                                                                                                      TCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAG                                                                                                                                                                                                                                           >  2:363147/1‑203                                                                                                                                                                                                 TTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCCTACTCCAGCGTCGGCATGCCCATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTCTATAAGCACGGTCAGCAAGGAATGGCCTATGAAATCGTCATTCAATATAACCCGCGTATAGCTTACCCGATGGAAGAGAACAACATTATCATGCAAGCCCAGTTGATGGCTCc                                                                                                              >  1:170569/1‑300                                                                                                                                                                                                                    CATAGTCCAGTCCGTGCTGACCGTTATTATACAGCAGTTCAGGCTCGATAAACGTTTTACCGAATGCCCAGTGCGTATAGTTAATTGGCATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAAC                                                                                           <  2:170628/301‑1                                                                                                                                                                                                                                                                                                             ATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACAATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTAC  <  2:704561/301‑1                                                                                                                                                                                                                                                                                                               GCCTACTCCAGCGTGGGCATGCCAATTAACTATCCGCACGGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACAATTACTTATTCCGTAGCTGGACCGACGCC                                              <  2:360256/255‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGTTAGAGTTAATGACGATTTCATAGGCCAGTCCTTGCTGACCGTGCTTATACAGCCGTTCAGTCTCGATAAACTTTTTACCGAATGACCAGTGCGGATAGTTAATTGGCATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1236748‑1237052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACAATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTAC  <  NC_000913/1237064‑1236769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.